Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1896 ATGATGTTATCGGCTTCGCCATCTTCTCTGACGAAGAGCTCGCTTGAAGAGATGCTTGATTCTCTTCGCCGGATAGAGGAGGAAGAAGCGAAGCCGAAGGACTCGCCGCCGGCATTGCCGGCTCGGCCATCGTCCCGGGCCCGGCTGCCTCCGGCGCGGCGGTCGTTGCCGAATAACTTCAAGGTCGGCGATGGTAGCGGTGGCGCCACCGCCACGGCGGAGTGCTTCCCAAATGGATTTGATGCCAAGAGGAAGGAGAATGACTGGGGACAACGACAACACGAGAGACCAAGAAGTGGCTTTGGAAGCAAGAAGGCGAAGATGGATGTGGAGTCGCCTTACGTGGCAGCATCAGAAGAGTGCATGGCACTTCCAGCATCAACTGATTGTTTTGCTTCATCTGGGAAGATCAGAGAATTGGTGGAAGATAGCATCTCTTACTTCATCAGAAAGAAACTTCGTGTTTGGTGTAGACGACAGAGAGGGCAGTGGGAACTAGGGACGATACAGTCAACTATGGGAGATGAGGCATCTGTTTCACTCTTGAATGGGAAGGTTATGAAAGTGTCCAGATCAGAGCTCCTACCGGCTAATCCTGACATCTTAGAGGGCATAGATGATCTTATGAAGCTCAGCTATTTGAATGAGCCATCGGTTCTTCACAACCTTAAGTTTAGATATTCTCATGATATGATTTATACTAAAGCAGGGCCCATTTTAATTGCGCTGAATCCCGTCAAAGATCTCCAGATTTATGGAAATGATTATGTCTCAGCTTACAGGGAGAAATTCATTGATAGTCCTCATGTTTATGCTGTTGCTAGTGCTGCTTTCAACGAGATGATAAGAGACGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCCGGGAAGACAGAGACAACAAAAATTGCTTTGCAATACTTAGCTGCTCTTGGTGGTGGCAGTAGTGGCATAGAAGATAAAGTTATCCAAACAAACAATGTACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCCCAGTGGGCAAAATATGTGGGGCTAAAATTCAAACCTGTAAGCCTGTTGAAGCTTCTAGAGTTGTTCAGCTGGGCACTGGTGAAAGGTCGTACCACATATTTTATCAACTTTGTGCTGGATCTTCACATGGTCTTAAAGAGAGACTGAATCTAAGAGCAGCGAGTGAATACAAATATCTTAATCAGAGTGACTGCATTACAATTGATGGTGTTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTGGATACTGTTAGAATTTCCAAAGAGGATCAAGAACTCATCTTTAAGATGCTTTCTGCAATATTATGGCTGGGAAATATATCATTCAAAGTTACGGGCAGTGCTAATCAGGTTCAGGTTGTGGATGATGAAGCTGTAACCAATGCTTCCCAGTTGATGGGTTGCAGTTCACAGGAATTAATGGCAGCATTATCTTCCCATAAAATCGAATCTGACAAGGATACTATTGCCAAAAAGTTGACACTGCAGCAGGCAATTGGTTCAAGAGACACAATTGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTATAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTACTGGGAAATCCATAGGTATCCTTGACATGTATGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGCTGTGTATAAATTATGCCAATGAGAGGCTTCAACAGCATCTCAATCGGCATCTGTTTAAGCTGGAGCAGAAGGATTGTGAGTCAGATGGAATTGAGTGGACTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAGCCTCTCGGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCCAATTCTTCTGATCTAACATTAGCAATCAAACTTAAGCAGCACCTAGATACAAATCCTTGCTTCAAAGGGGAAAAAGGAAGAGCTTTCAATGTTCATCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAGAAGAACAGAGATTCACTGCCATCTGATTCCATTCAATTCCTGTCATCATGTAATTGTGAATTGCTGCCATTGTTTTCCAAAAAGTTTAACCAGTATCAGAAACAATCAAATTCCTTTGACATTGCTGCACTGGGTTCACAGAAGCTGAGTGTTCTTACAAACTTAAAGGATCAATTGTTCAAGTTGATGCACGAGTTGGAGTGCACCACACCTCACTTTATTCACTGCATAAGGCCAAATACCAAGCAGCTTCCCAGCACTTATGATGAAGACCTTGTTCTACAACAGCTCAGGTGTTGTGGTGTACTTGAAGTTGCTAGAATTTCAAGGGCTGGGTATTGTGCTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGATCACAAATCTAACGATCCATTGAGCACTTCAGTTGCAGTTTTGCAACAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTTTACCAAACTGTATCTTCGAGCAGGGAAGATTGGTGCACTGGAGCTTAAGAGAAAACACGTTTTGCATGGAATACTGGGGGTTCAAAAATGCTTCCGTGGCTATCAAGCTCGGAGTTATTTCTTTGACCTTAAGAATGGAGTGGCAACGTTACAATCATTTATTCGTGGAGAAATTACAAGAAGGAAATATGGTGTTACGGTGAAGTCTTTGATGACAATTCACTCTAAAAACCTTGAGGAGATCCAAGCAGTCATACTACTACAATCTGTAATTCGTGGGTGGCTGACTCGAAGGGATGCTAGTGGAACGAAAAAGTTGAAGAATTATCCTGAAACTGCAAAACCTAGGCAGAAGTCACATGTTAAGATGCCAGAAGTAGAGGATATATCCAAAGATCAGGTTCAGAATCCATCTTCAGCGTTAGCAGAACTCCAAAGGCGAGTTGACAAGGCTGAAGCAACTGTGGAGCAAACGGAAGAGGAAAATGCTGAATTGAGAGAACAGCTAAAACAATCTCAGAGAAAGTGGGTTGAATATGAGGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAACAGAGGACATCTTTACGGATGAGCCTTGTTGCTGCTAAAAAGAACCTTACTTCTGAGAATGGCACTACTCAACCTGCAAGACACAATGTCCTGTCACCTCGCTACTGTGATTCTGAAGATGCTACTTCTGTTGGATCTCAAACAACTGGTGCGAGCACTCCGATAAAGTTTTCTAGCACTCTCTCTGTCTCTGATGCTGGTAGAGAGGCTAACGTTACTTTGACCACAGTTGGCAATCTTATGAAGGAATTTGAGCAGCGAAGGCAGAACTTCGACGATGAAGTAAAAGCCCTCAATGGGCAGTCTGCCAGCACAAATTCCGTCGAAGAACTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGCTTACGGGAGACAAAAGCAAAGCTTCATAAAGGGAATTCGGAAGTGGAAAAAAGTCGCAGGACATGGTGGGGGAAATTAAGAAGTTAA 3615 0.4274 MMLSASPSSLTKSSLEEMLDSLRRIEEEEAKPKDSPPALPARPSSRARLPPARRSLPNNFKVGDGSGGATATAECFPNGFDAKRKENDWGQRQHERPRSGFGSKKAKMDVESPYVAASEECMALPASTDCFASSGKIRELVEDSISYFIRKKLRVWCRRQRGQWELGTIQSTMGDEASVSLLNGKVMKVSRSELLPANPDILEGIDDLMKLSYLNEPSVLHNLKFRYSHDMIYTKAGPILIALNPVKDLQIYGNDYVSAYREKFIDSPHVYAVASAAFNEMIRDEVNQSIIISGESGSGKTETTKIALQYLAALGGGSSGIEDKVIQTNNVLEAFGNAKTSRNDNSSRFGKLIEIHFSPVGKICGAKIQTCKPVEASRVVQLGTGERSYHIFYQLCAGSSHGLKERLNLRAASEYKYLNQSDCITIDGVDDAKKFHQLMKALDTVRISKEDQELIFKMLSAILWLGNISFKVTGSANQVQVVDDEAVTNASQLMGCSSQELMAALSSHKIESDKDTIAKKLTLQQAIGSRDTIAKFIYASLFDWLIEQVNKSLEVGKKCTGKSIGILDMYGFESFQKNSFEQLCINYANERLQQHLNRHLFKLEQKDCESDGIEWTKVDFEDNQECLDLFEKKPLGLLSLLDEESNLPNSSDLTLAIKLKQHLDTNPCFKGEKGRAFNVHHYAGEVLYDTNGFLEKNRDSLPSDSIQFLSSCNCELLPLFSKKFNQYQKQSNSFDIAALGSQKLSVLTNLKDQLFKLMHELECTTPHFIHCIRPNTKQLPSTYDEDLVLQQLRCCGVLEVARISRAGYCARMTHQEFSTRYGFLLSEDHKSNDPLSTSVAVLQQFNIPSEMYQVGFTKLYLRAGKIGALELKRKHVLHGILGVQKCFRGYQARSYFFDLKNGVATLQSFIRGEITRRKYGVTVKSLMTIHSKNLEEIQAVILLQSVIRGWLTRRDASGTKKLKNYPETAKPRQKSHVKMPEVEDISKDQVQNPSSALAELQRRVDKAEATVEQTEEENAELREQLKQSQRKWVEYEAKMKSMEEAWQKQRTSLRMSLVAAKKNLTSENGTTQPARHNVLSPRYCDSEDATSVGSQTTGASTPIKFSSTLSVSDAGREANVTLTTVGNLMKEFEQRRQNFDDEVKALNGQSASTNSVEELRKLKQRFEGWKKQYKVSLRETKAKLHKGNSEVEKSRRTWWGKLRS* 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1896 1204 ProSiteProfiles Myosin motor domain profile. 203 874 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 CDD MYSc_Myo8 217 862 IPR036022 -
Dod03g1896 1204 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 150 199 IPR004009 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 MobiDBLite consensus disorder prediction 79 105 - -
Dod03g1896 1204 MobiDBLite consensus disorder prediction 962 985 - -
Dod03g1896 1204 MobiDBLite consensus disorder prediction 1 105 - -
Dod03g1896 1204 PRINTS Myosin heavy chain signature 616 644 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 PRINTS Myosin heavy chain signature 330 357 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 PRINTS Myosin heavy chain signature 233 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 PRINTS Myosin heavy chain signature 563 591 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 PRINTS Myosin heavy chain signature 287 312 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 Gene3D - 387 443 - -
Dod03g1896 1204 SMART MYSc_2a 197 875 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 ProSiteProfiles IQ motif profile. 936 964 IPR000048 GO:0005515
Dod03g1896 1204 Gene3D Myosin VI head, motor domain, U50 subdomain 444 552 - -
Dod03g1896 1204 ProSiteProfiles IQ motif profile. 899 928 IPR000048 GO:0005515
Dod03g1896 1204 Pfam IQ calmodulin-binding motif 938 954 IPR000048 GO:0005515
Dod03g1896 1204 Gene3D Kinesin motor domain 202 807 IPR036961 -
Dod03g1896 1204 MobiDBLite consensus disorder prediction 962 996 - -
Dod03g1896 1204 PANTHER MYOSIN 36 1202 - -
Dod03g1896 1204 MobiDBLite consensus disorder prediction 1 16 - -
Dod03g1896 1204 Gene3D - 880 926 - -
Dod03g1896 1204 PANTHER MYOSIN-2 ISOFORM X1 36 1202 - -
Dod03g1896 1204 SMART iq_5 935 957 IPR000048 GO:0005515
Dod03g1896 1204 SMART iq_5 875 897 IPR000048 GO:0005515
Dod03g1896 1204 SMART iq_5 898 920 IPR000048 GO:0005515
Dod03g1896 1204 MobiDBLite consensus disorder prediction 17 35 - -
Dod03g1896 1204 Coils Coil 1129 1149 - -
Dod03g1896 1204 ProSiteProfiles IQ motif profile. 878 905 IPR000048 GO:0005515
Dod03g1896 1204 Coils Coil 997 1045 - -
Dod03g1896 1204 MobiDBLite consensus disorder prediction 1183 1204 - -
Dod03g1896 1204 Gene3D - 808 875 - -
Dod03g1896 1204 Pfam Myosin head (motor domain) 206 862 IPR001609 GO:0003774|GO:0005524|GO:0016459
Dod03g1896 1204 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 921 IPR027417 -
Dod03g1896 1204 Gene3D - 575 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1896 Dod-Chr3 40137021 40154667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1896 1 1201 Myosins gene family AT5G54280 57.015 0.0 1384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1896 K10357 - gmx:100819335 1652.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1896 03 40137021 40154667 Dod03g1896 03 40137021 40154667 ECH