Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g1896 | ATGATGTTATCGGCTTCGCCATCTTCTCTGACGAAGAGCTCGCTTGAAGAGATGCTTGATTCTCTTCGCCGGATAGAGGAGGAAGAAGCGAAGCCGAAGGACTCGCCGCCGGCATTGCCGGCTCGGCCATCGTCCCGGGCCCGGCTGCCTCCGGCGCGGCGGTCGTTGCCGAATAACTTCAAGGTCGGCGATGGTAGCGGTGGCGCCACCGCCACGGCGGAGTGCTTCCCAAATGGATTTGATGCCAAGAGGAAGGAGAATGACTGGGGACAACGACAACACGAGAGACCAAGAAGTGGCTTTGGAAGCAAGAAGGCGAAGATGGATGTGGAGTCGCCTTACGTGGCAGCATCAGAAGAGTGCATGGCACTTCCAGCATCAACTGATTGTTTTGCTTCATCTGGGAAGATCAGAGAATTGGTGGAAGATAGCATCTCTTACTTCATCAGAAAGAAACTTCGTGTTTGGTGTAGACGACAGAGAGGGCAGTGGGAACTAGGGACGATACAGTCAACTATGGGAGATGAGGCATCTGTTTCACTCTTGAATGGGAAGGTTATGAAAGTGTCCAGATCAGAGCTCCTACCGGCTAATCCTGACATCTTAGAGGGCATAGATGATCTTATGAAGCTCAGCTATTTGAATGAGCCATCGGTTCTTCACAACCTTAAGTTTAGATATTCTCATGATATGATTTATACTAAAGCAGGGCCCATTTTAATTGCGCTGAATCCCGTCAAAGATCTCCAGATTTATGGAAATGATTATGTCTCAGCTTACAGGGAGAAATTCATTGATAGTCCTCATGTTTATGCTGTTGCTAGTGCTGCTTTCAACGAGATGATAAGAGACGAAGTAAATCAGTCCATTATCATAAGTGGTGAGAGTGGATCCGGGAAGACAGAGACAACAAAAATTGCTTTGCAATACTTAGCTGCTCTTGGTGGTGGCAGTAGTGGCATAGAAGATAAAGTTATCCAAACAAACAATGTACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGAAAGTTGATTGAAATTCATTTCAGCCCAGTGGGCAAAATATGTGGGGCTAAAATTCAAACCTGTAAGCCTGTTGAAGCTTCTAGAGTTGTTCAGCTGGGCACTGGTGAAAGGTCGTACCACATATTTTATCAACTTTGTGCTGGATCTTCACATGGTCTTAAAGAGAGACTGAATCTAAGAGCAGCGAGTGAATACAAATATCTTAATCAGAGTGACTGCATTACAATTGATGGTGTTGATGATGCTAAAAAATTTCATCAGCTGATGAAAGCACTGGATACTGTTAGAATTTCCAAAGAGGATCAAGAACTCATCTTTAAGATGCTTTCTGCAATATTATGGCTGGGAAATATATCATTCAAAGTTACGGGCAGTGCTAATCAGGTTCAGGTTGTGGATGATGAAGCTGTAACCAATGCTTCCCAGTTGATGGGTTGCAGTTCACAGGAATTAATGGCAGCATTATCTTCCCATAAAATCGAATCTGACAAGGATACTATTGCCAAAAAGTTGACACTGCAGCAGGCAATTGGTTCAAGAGACACAATTGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTATAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAAAAATGTACTGGGAAATCCATAGGTATCCTTGACATGTATGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGCTGTGTATAAATTATGCCAATGAGAGGCTTCAACAGCATCTCAATCGGCATCTGTTTAAGCTGGAGCAGAAGGATTGTGAGTCAGATGGAATTGAGTGGACTAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTATTTGAGAAGAAGCCTCTCGGTCTACTCTCCTTGTTGGATGAGGAATCAAATTTGCCCAATTCTTCTGATCTAACATTAGCAATCAAACTTAAGCAGCACCTAGATACAAATCCTTGCTTCAAAGGGGAAAAAGGAAGAGCTTTCAATGTTCATCACTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAGAAGAACAGAGATTCACTGCCATCTGATTCCATTCAATTCCTGTCATCATGTAATTGTGAATTGCTGCCATTGTTTTCCAAAAAGTTTAACCAGTATCAGAAACAATCAAATTCCTTTGACATTGCTGCACTGGGTTCACAGAAGCTGAGTGTTCTTACAAACTTAAAGGATCAATTGTTCAAGTTGATGCACGAGTTGGAGTGCACCACACCTCACTTTATTCACTGCATAAGGCCAAATACCAAGCAGCTTCCCAGCACTTATGATGAAGACCTTGTTCTACAACAGCTCAGGTGTTGTGGTGTACTTGAAGTTGCTAGAATTTCAAGGGCTGGGTATTGTGCTCGAATGACTCATCAAGAGTTTTCCACAAGGTATGGGTTTCTGCTTTCTGAGGATCACAAATCTAACGATCCATTGAGCACTTCAGTTGCAGTTTTGCAACAATTTAATATCCCTTCTGAAATGTACCAAGTTGGCTTTACCAAACTGTATCTTCGAGCAGGGAAGATTGGTGCACTGGAGCTTAAGAGAAAACACGTTTTGCATGGAATACTGGGGGTTCAAAAATGCTTCCGTGGCTATCAAGCTCGGAGTTATTTCTTTGACCTTAAGAATGGAGTGGCAACGTTACAATCATTTATTCGTGGAGAAATTACAAGAAGGAAATATGGTGTTACGGTGAAGTCTTTGATGACAATTCACTCTAAAAACCTTGAGGAGATCCAAGCAGTCATACTACTACAATCTGTAATTCGTGGGTGGCTGACTCGAAGGGATGCTAGTGGAACGAAAAAGTTGAAGAATTATCCTGAAACTGCAAAACCTAGGCAGAAGTCACATGTTAAGATGCCAGAAGTAGAGGATATATCCAAAGATCAGGTTCAGAATCCATCTTCAGCGTTAGCAGAACTCCAAAGGCGAGTTGACAAGGCTGAAGCAACTGTGGAGCAAACGGAAGAGGAAAATGCTGAATTGAGAGAACAGCTAAAACAATCTCAGAGAAAGTGGGTTGAATATGAGGCAAAGATGAAATCAATGGAGGAGGCATGGCAAAAACAGAGGACATCTTTACGGATGAGCCTTGTTGCTGCTAAAAAGAACCTTACTTCTGAGAATGGCACTACTCAACCTGCAAGACACAATGTCCTGTCACCTCGCTACTGTGATTCTGAAGATGCTACTTCTGTTGGATCTCAAACAACTGGTGCGAGCACTCCGATAAAGTTTTCTAGCACTCTCTCTGTCTCTGATGCTGGTAGAGAGGCTAACGTTACTTTGACCACAGTTGGCAATCTTATGAAGGAATTTGAGCAGCGAAGGCAGAACTTCGACGATGAAGTAAAAGCCCTCAATGGGCAGTCTGCCAGCACAAATTCCGTCGAAGAACTTCGGAAACTTAAACAAAGATTTGAGGGATGGAAGAAACAATACAAGGTTAGCTTACGGGAGACAAAAGCAAAGCTTCATAAAGGGAATTCGGAAGTGGAAAAAAGTCGCAGGACATGGTGGGGGAAATTAAGAAGTTAA | 3615 | 0.4274 | MMLSASPSSLTKSSLEEMLDSLRRIEEEEAKPKDSPPALPARPSSRARLPPARRSLPNNFKVGDGSGGATATAECFPNGFDAKRKENDWGQRQHERPRSGFGSKKAKMDVESPYVAASEECMALPASTDCFASSGKIRELVEDSISYFIRKKLRVWCRRQRGQWELGTIQSTMGDEASVSLLNGKVMKVSRSELLPANPDILEGIDDLMKLSYLNEPSVLHNLKFRYSHDMIYTKAGPILIALNPVKDLQIYGNDYVSAYREKFIDSPHVYAVASAAFNEMIRDEVNQSIIISGESGSGKTETTKIALQYLAALGGGSSGIEDKVIQTNNVLEAFGNAKTSRNDNSSRFGKLIEIHFSPVGKICGAKIQTCKPVEASRVVQLGTGERSYHIFYQLCAGSSHGLKERLNLRAASEYKYLNQSDCITIDGVDDAKKFHQLMKALDTVRISKEDQELIFKMLSAILWLGNISFKVTGSANQVQVVDDEAVTNASQLMGCSSQELMAALSSHKIESDKDTIAKKLTLQQAIGSRDTIAKFIYASLFDWLIEQVNKSLEVGKKCTGKSIGILDMYGFESFQKNSFEQLCINYANERLQQHLNRHLFKLEQKDCESDGIEWTKVDFEDNQECLDLFEKKPLGLLSLLDEESNLPNSSDLTLAIKLKQHLDTNPCFKGEKGRAFNVHHYAGEVLYDTNGFLEKNRDSLPSDSIQFLSSCNCELLPLFSKKFNQYQKQSNSFDIAALGSQKLSVLTNLKDQLFKLMHELECTTPHFIHCIRPNTKQLPSTYDEDLVLQQLRCCGVLEVARISRAGYCARMTHQEFSTRYGFLLSEDHKSNDPLSTSVAVLQQFNIPSEMYQVGFTKLYLRAGKIGALELKRKHVLHGILGVQKCFRGYQARSYFFDLKNGVATLQSFIRGEITRRKYGVTVKSLMTIHSKNLEEIQAVILLQSVIRGWLTRRDASGTKKLKNYPETAKPRQKSHVKMPEVEDISKDQVQNPSSALAELQRRVDKAEATVEQTEEENAELREQLKQSQRKWVEYEAKMKSMEEAWQKQRTSLRMSLVAAKKNLTSENGTTQPARHNVLSPRYCDSEDATSVGSQTTGASTPIKFSSTLSVSDAGREANVTLTTVGNLMKEFEQRRQNFDDEVKALNGQSASTNSVEELRKLKQRFEGWKKQYKVSLRETKAKLHKGNSEVEKSRRTWWGKLRS* | 1205 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g1896 | 1204 | ProSiteProfiles | Myosin motor domain profile. | 203 | 874 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | CDD | MYSc_Myo8 | 217 | 862 | IPR036022 | - | |
Dod03g1896 | 1204 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 150 | 199 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 79 | 105 | - | - | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 962 | 985 | - | - | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 1 | 105 | - | - | |
Dod03g1896 | 1204 | PRINTS | Myosin heavy chain signature | 616 | 644 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | PRINTS | Myosin heavy chain signature | 330 | 357 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | PRINTS | Myosin heavy chain signature | 233 | 252 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | PRINTS | Myosin heavy chain signature | 563 | 591 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | PRINTS | Myosin heavy chain signature | 287 | 312 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | Gene3D | - | 387 | 443 | - | - | |
Dod03g1896 | 1204 | SMART | MYSc_2a | 197 | 875 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | ProSiteProfiles | IQ motif profile. | 936 | 964 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 444 | 552 | - | - | |
Dod03g1896 | 1204 | ProSiteProfiles | IQ motif profile. | 899 | 928 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | Pfam | IQ calmodulin-binding motif | 938 | 954 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | Gene3D | Kinesin motor domain | 202 | 807 | IPR036961 | - | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 962 | 996 | - | - | |
Dod03g1896 | 1204 | PANTHER | MYOSIN | 36 | 1202 | - | - | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Dod03g1896 | 1204 | Gene3D | - | 880 | 926 | - | - | |
Dod03g1896 | 1204 | PANTHER | MYOSIN-2 ISOFORM X1 | 36 | 1202 | - | - | |
Dod03g1896 | 1204 | SMART | iq_5 | 935 | 957 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | SMART | iq_5 | 875 | 897 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | SMART | iq_5 | 898 | 920 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 17 | 35 | - | - | |
Dod03g1896 | 1204 | Coils | Coil | 1129 | 1149 | - | - | |
Dod03g1896 | 1204 | ProSiteProfiles | IQ motif profile. | 878 | 905 | IPR000048 | GO:0005515 | |
Dod03g1896 | 1204 | Coils | Coil | 997 | 1045 | - | - | |
Dod03g1896 | 1204 | MobiDBLite | consensus disorder prediction | 1183 | 1204 | - | - | |
Dod03g1896 | 1204 | Gene3D | - | 808 | 875 | - | - | |
Dod03g1896 | 1204 | Pfam | Myosin head (motor domain) | 206 | 862 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
Dod03g1896 | 1204 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 179 | 921 | IPR027417 | - | |
Dod03g1896 | 1204 | Gene3D | - | 575 | 764 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g1896 | Dod-Chr3 | 40137021 | 40154667 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g1896 | 1 | 1201 | Myosins gene family | AT5G54280 | 57.015 | 0.0 | 1384 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g1896 | K10357 | - | gmx:100819335 | 1652.11 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod03g1896 | 03 | 40137021 | 40154667 | Dod03g1896 | 03 | 40137021 | 40154667 | ECH |