Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1889 ATGGAGCAGGAGATGGCAGACATAGAGTCTCAGACTACTTATAATGCAACAGTGCTGGAGGAGACAACTGACAACTTCAAAGGAAATCGTCCTGTGACTCTCAAGTTCCGTGATGTTGCCTATAAAATTAAAACCAAAAACGATGGATTAATAGAGAAGAACACAAAGGCAGAAGAGAAAATAATAATCAATGGAGTGACAGGCATGGTTCAACCAGGTGAAATTCTAGCCATGCTAGGTCCATCAGGAAGTGGCAAAACAACTCTGCTAACAGCATTAGGTGGCCGGCTTCGAGGGAAACTCTATGGAACCATTACTTATAATGGCAAAGCCTTCTCCAATGCAATGAAGCGGATCACTGGCTTTGTTACTCAAGATGATGTTCTTTATTCCCATTTGACTGTTACTGAAACTCTAGTGTTCACTGCCCTTCTTAGGTTGCCAAGTAGTTTCACCAAAGATGAGAAAATTGCTCATGCAAAATCAGTGATAGCTCAACTGGGTTTAGCCAAGTGCAAGGACAGCATCGTTGGAGGCCCATTGCTGAGAGGGGTTTCAGGGGGAGAGCGAAAAAGGGTCAGCATTGGACAAGAACTGCTAATAAACCCAAGTTTGTTGTTTCTGGATGAACCCACATCTGGCCTAGACTCAACAACTGCTCAAAGAATTGTCTCAACTTTATGGGAGTTAGCAAGTGGAGGGAGAACTGTAGTGATGACAATACACCAACCTTCAAGTAGGATATACTACATGTTTCACAAAGTTTTACTGCTATCAGAAGGGAGCCTAGTGTATTTTGGAAAGGGCTCTGAAGCCATGAAATACTTCTCTAGTATTGGTTATGTCCCTTCCTTGGCCATGAACCCTTCGGACTTCCTTTTGGATCTGGCAAACGGTATATACACTGATCAGTCAAATGAGGACCATGTGTTAAATAAGCACAAATTGATTTCTTCATATAAGAGTTACTTTGATGCCGAGTTGAAGCCAGCACTTCATGAAAATTGTGACTCTGATAGTCAGGGTACATTTGAAGATAAAGGCTTTGGGAATTGGCCTACTAGTTGGTGGCAGCAATTCTTTGTCCTGCTAAGAAGAGATGTCAAAGAAAGAAAACATGAATCATTCTCAACCCTGAGGATTTGTCAGGTCATCCTGGTTGCCATCATTTCAGGACTATTGTGGTATAAGTCTAATATTTCACACTTGCAGGATCAGATTGGGCTTCTATTCTTCATAGCTGGCTTCTGGAGTATCCTCCCTCTCTACCAAGCCATATACACGTTCCCGCAAGAACTAACGATGCTGGAGAAAGAACGATCGTCGGGAATGTACAGGCTCTCCTCATACTTCATGTCAAGGATGGTGGCTGACCTTCCAATGGAACTTGTCCTTCCCACTGTGTTCCTTATCATAACCTATTGGATGGCAGGGCTGAAAGCTCATATGGTGAACTTTTTGTACACATTGTTCAGCGTCTTACTTAATGTGTTAGTCTCACAAGGGCTAGGCCTTGCCATAGGTGCTATTGTGATGGATCAGAAATCCGCAACGACACTTGCCTCAGTGATAATGCTAAGTTTCCTACTGGCTGGAGGATTCTATGTTCAACATGAGCCAAAATTTATAGCATGGGTGAAGCACATCTCCCTCGGCTACTACACATACGAGCTGTTGATTGGGTCTCAGTATACCACTAGTGACACATACCCATGTTCTACTGGCCAGTGTTCAGTTACAGAATTTCCTATGATAAAGCAAATGGGGTTTCATGTGAAAGGGCAAGTCATGGCTGCATTGGCGCTGTTCATAATGCTAATTGGCTACAGAGTTATGGCTTATGTTGCTCTTATGAGGATTGGAGTGACAAAGAAATTGGCGTAG 1884 0.4305 MEQEMADIESQTTYNATVLEETTDNFKGNRPVTLKFRDVAYKIKTKNDGLIEKNTKAEEKIIINGVTGMVQPGEILAMLGPSGSGKTTLLTALGGRLRGKLYGTITYNGKAFSNAMKRITGFVTQDDVLYSHLTVTETLVFTALLRLPSSFTKDEKIAHAKSVIAQLGLAKCKDSIVGGPLLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELASGGRTVVMTIHQPSSRIYYMFHKVLLLSEGSLVYFGKGSEAMKYFSSIGYVPSLAMNPSDFLLDLANGIYTDQSNEDHVLNKHKLISSYKSYFDAELKPALHENCDSDSQGTFEDKGFGNWPTSWWQQFFVLLRRDVKERKHESFSTLRICQVILVAIISGLLWYKSNISHLQDQIGLLFFIAGFWSILPLYQAIYTFPQELTMLEKERSSGMYRLSSYFMSRMVADLPMELVLPTVFLIITYWMAGLKAHMVNFLYTLFSVLLNVLVSQGLGLAIGAIVMDQKSATTLASVIMLSFLLAGGFYVQHEPKFIAWVKHISLGYYTYELLIGSQYTTSDTYPCSTGQCSVTEFPMIKQMGFHVKGQVMAALALFIMLIGYRVMAYVALMRIGVTKKLA* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1889 627 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524
Dod03g1889 627 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
Dod03g1889 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 280 IPR027417 -
Dod03g1889 627 Pfam ABC-2 type transporter 242 309 IPR043926 GO:0140359
Dod03g1889 627 SMART AAA_5 72 262 IPR003593 -
Dod03g1889 627 Pfam ABC transporter 64 213 IPR003439 GO:0005524
Dod03g1889 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 285 IPR003439 GO:0005524
Dod03g1889 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 27 621 - -
Dod03g1889 627 Gene3D - 48 279 IPR027417 -
Dod03g1889 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1889 Dod-Chr3 39808144 39811955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1889 71 274 Calmodulin-binding Proteins AT2G36910 26.190 4.49e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1889 K05681 - gmx:100812397 930.628