Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1878 ATGGAGTTTCCCAAACCTCTCTGCCTCTTGTTGGTTCTCCTCACTATTGTCTCTAGCACCCAAGCCCACAAATTCGACGTGGGTGGAAGCGCACTGTGGGTTCCAAACCCGTCCGAGAATTATAATCAATGGGCTGGGAGGAACAGGTTCCAAATCAATGACACTCTAGTTTTCAAGTACAAGAAGGGTTCAGACTCAGTGTTGGAGGTGAATAAAGAGGACTACGACAAGTGCAACAAGACCAACCCCATCAAGAAGTTCGAGGACGGTGACACGGAGTTCAAGTTTGATCGATCGGGGCCATTCTACTTCATCAGTGGAAAAGATCAAAACTGTGAGAAAGGTCATCAAAAGCTGACCGTTGTGGTCTTGTCTCCACGAGGACAATCACAAACACCACCACCACCACCACCACCTCCAAAATCACCTTCCCCTTCCCCAAAACCATCACCATCACCTGTACCTTCACTTTCACCTTCACACCCGCCGTCGCCCTCCCCGGCGGTCTCCCCGGTACCTACACCTTCCGGCCACCCTCCGTCGCCCTCTCCGACGGTTTCCCCAGTACCTACACCTTCCGGCCACTCTCCCTCGCCCTCTCCGGCGGTTTCTCCAGTACCTACACCTTCCGGAAGTCCTCCATCGCCCTCTCCGGCGGTTTCCCCAGTACCTTCCAGCGGACCCCCGGCACCATCTCCGGGGACGTCGCCGGTACCGGCCGGGAAATCACCATCGCCATCTCCGGGACCTCCGGCACCCTCTGCGGCGACTCCTCCGTCGTCGGCCGGTAAGGCGCCTTCATCTTCAGCTGGTTCGCCGCCGCCGTCACCCGGAGGGAGTGAAACGGCGCCAGCGCCGTCTCGTGCTTGGGCTGCCGGTCCTTCAGGCTTCTTGGGGTTTTTGGTTTCCATCGCGGTTGGTGCTGTCCTGTTGCGTTGA 939 0.5751 MEFPKPLCLLLVLLTIVSSTQAHKFDVGGSALWVPNPSENYNQWAGRNRFQINDTLVFKYKKGSDSVLEVNKEDYDKCNKTNPIKKFEDGDTEFKFDRSGPFYFISGKDQNCEKGHQKLTVVVLSPRGQSQTPPPPPPPPKSPSPSPKPSPSPVPSLSPSHPPSPSPAVSPVPTPSGHPPSPSPTVSPVPTPSGHSPSPSPAVSPVPTPSGSPPSPSPAVSPVPSSGPPAPSPGTSPVPAGKSPSPSPGPPAPSAATPPSSAGKAPSSSAGSPPPSPGGSETAPAPSRAWAAGPSGFLGFLVSIAVGAVLLR* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1878 312 CDD OsENODL1_like 23 124 IPR041846 -
Dod03g1878 312 Gene3D - 21 127 IPR008972 -
Dod03g1878 312 Pfam Plastocyanin-like domain 33 115 IPR003245 GO:0009055
Dod03g1878 312 PANTHER BLUE COPPER PROTEIN 5 311 IPR039391 GO:0009055
Dod03g1878 312 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055
Dod03g1878 312 SUPERFAMILY Cupredoxins 22 124 IPR008972 -
Dod03g1878 312 MobiDBLite consensus disorder prediction 129 257 - -
Dod03g1878 312 MobiDBLite consensus disorder prediction 126 294 - -
Dod03g1878 312 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1878 Dod-Chr3 38386704 38388314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1878 7 145 Phytocyanin Superfamily AT4G27520 56.115 6.42e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1878 - - gmx:100795901 216.468