Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1876 ATGACTGGCAGAGAAATCCTCCATAAGATGAAGGAAAAAGTTTTGGGCTCATCTGATCCTGATTCAGGGAAAGGAAAAAGCAAGATGTCAAAGCACATAACTCATGGCTTTCACTTGGTAAAGGGAAGATCAGATCATGCCATGGAAGATTATCTTGTTGCTCAATTTAAGCAAGTTGGCGACAATGAATTGGGTTTATTTGCAATATTTGATGGCCACTCGGGTCATAGTGTACCTGATTATCTGCGGTCTCATTTGTTTGATAATATCTTAGAAGAGCCTTACTTCTGGACAGATCCTGCTAATGCCGTCAAGAAAGCTTACAGTATGACTGATTCTACTATTTTAGAAAAATCAGGTGAATTGGGTAGAGGGGGTTCAACTGCTGTCACAGCAATATTGATCAATTGTCAGAAGCTAGTAGTGGCTAATATTGGGGATTCTCGTGCTGTCTTAAGCAAGAATGGCGAGGCAAGACAACTATCAGTGGATCATGATGCAAACACTGAAAGTGAGGATATCAAGAACAGAGGTGGTTTTGTATCAAACTTCCCAGGGGATGTTCCACGGGTTGATGGGCAGTTGGCAGTGTCAAGGGCATTTGGTGACAAAAGCCTGAAGAAGCACTTGAGCTCGGAGCCATTTGTGACAGTGGAGGTGATAGATGATGATGCAGAGTTTATCATATTAGCCAGTGACGGGTTATGGAAGGTCAGATTTGATATATGA 729 0.4211 MTGREILHKMKEKVLGSSDPDSGKGKSKMSKHITHGFHLVKGRSDHAMEDYLVAQFKQVGDNELGLFAIFDGHSGHSVPDYLRSHLFDNILEEPYFWTDPANAVKKAYSMTDSTILEKSGELGRGGSTAVTAILINCQKLVVANIGDSRAVLSKNGEARQLSVDHDANTESEDIKNRGGFVSNFPGDVPRVDGQLAVSRAFGDKSLKKHLSSEPFVTVEVIDDDAEFIILASDGLWKVRFDI* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1876 242 SMART PP2C_4 29 242 IPR001932 -
Dod03g1876 242 SUPERFAMILY PP2C-like 30 238 IPR036457 -
Dod03g1876 242 Pfam Protein phosphatase 2C 45 238 IPR001932 -
Dod03g1876 242 ProSiteProfiles PPM-type phosphatase domain profile. 34 242 IPR001932 -
Dod03g1876 242 Gene3D - 16 241 IPR036457 -
Dod03g1876 242 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 238 - -
Dod03g1876 242 CDD PP2Cc 35 238 IPR001932 -
Dod03g1876 242 PANTHER PROTEIN PHOSPHATASE 2C 1 238 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1876 Dod-Chr3 38327983 38332563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1876 1 238 PP2C-type Phosphatase Gene Family AT3G15260 75.102 4.90e-136 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1876 K17506 - gmx:100787942 412.92