Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1860 ATGAAGAAGATCAATGTATTACTCAGAAAGTGCAAGAGTTTATCAAGGCAGCTAGGAAGATCTTCATCATACAGTAGCTTGAGGTCCAAATCTGCAAAAGAGGACCTATGGGCTGCACATGGCATGCAAGAAGACGAAAAATGTGAAACAATATTTGTCGGCAGCACAAGGAAACGGTATGTGGTCAGCTCCAAGCATCTGAATCACCCTATTCTGAATGCTCTAATCAACAAGTCAAAGCAAAAGGGCAGTGATGAAAATGTTTTAGTGATCAACTGTGAGGTGGTTCTCTTTGATCATCTGCTGTGGATGCTAGAAAATGCAGATCCTATGTTCAGTTCTGACTCTTTGGAGGAGTTGGCTGAGCTCTATGTGTATTAA 381 0.4147 MKKINVLLRKCKSLSRQLGRSSSYSSLRSKSAKEDLWAAHGMQEDEKCETIFVGSTRKRYVVSSKHLNHPILNALINKSKQKGSDENVLVINCEVVLFDHLLWMLENADPMFSSDSLEELAELYVY* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1860 126 Pfam Auxin responsive protein 11 105 IPR003676 GO:0009733
Dod03g1860 126 PANTHER EXPRESSED PROTEIN 3 126 - -
Dod03g1860 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1860 Dod-Chr3 36338035 36339940 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1860 50 105 Calmodulin-binding Proteins AT4G34750 37.931 6.15e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1860 - - gmx:100527910 194.126