Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1821 ATGTTGATAACAGTCAGGGATGCTTCCTCTTCTTCTCCCCTCTGTTTCTGGCTTAATCGTATCAGCACAAAACCCTCTGTCTCTAGAACTCCCAAAACTTCAATTTGCCAAGCCAGTTTCTCTGTCCAGAGGAGACCCAACAGTGCCCGCTCATGGAATACTGGGCATGTCTCTACCAGCTATGAGGTAGCAAACTTTGATCCCTTGGGTATTAACCCAAGTTTATCTTCTGCTTTAAATTGTACTTGGGAGAATCTGGCATGCTTGTTTTCACAGACATTTGAGAGTGCTTCCAGTACAGACAAAGAAAAACCTAACTCTTCTCGTGGAGTAGCAGCTGCTATAGAGGATAGTTCAATCGATTTTGGTGATTTCTTTAAAGGTCCACTGCCAGGAAAATTTCTCAAGCTTTTAGGATTTCTTGCCTTGTCACGGCTTGGTGTGTATATACCTCTAGGTGGGGTTAATAGAGAGGCTTTTGTTGGAAATTTAGATCAGAACAGTTTATTAAGCACTCTAGACTCATTTTCTGGAGGAGGTATTGGTAGACTTGGGATTTGTTCCCTTGGTATTGTTCCTTTCATCAATGCACAGATTGTTTTCCAGCTTCTTGCACAAGTCTATCCAAAGTTGCAAGATCTTCAGAAAAGAGAAGGTGAGGCTGGAAGAAAAAAAGTTCTTCAGTACACTCGATATGCTTCAGTTGGATTTGCAATTGTACAGGCAATTGGCCAAGTACTCTACCTACGTCCCTATGTCAATGACTTTAGTACAGAGTGGGTTCTTTCTTCTGTGATCTTACTGACTCTTGGCTCTGTGTTTACAACATACATCGGGGAACGAATTACAGACCTAAAACTTGGCAATGGCACCTCTCTTTTGATATTTACAAACATTATCTCCTACTTGCCAGCTTCTTTTGGTAGGACAATTGCACAAGCATTTAAGGATGCTAACTACATTGGACTTGTTACCATCATTTTGTCCTTCTTTCTGTTGGTGGTTGGTATTGTTTATGTTCAGGAAGCAGAGAGAAAAATTCCTCTTAACTATGCTTCAAGATTCACTAGCAGAAGCAGAGGACTTGAAAAATCCGCTTACCTACCCTTTAAGGTAAATAGCTCTGGAGTAATGCCCATCATATTTTCTACATCATCATTAGCTCTTCCTGGTACTTTAGCACGCTTCACTGGATTGAGTGCACTGAAGAAGGCTGCAGTGGCTTTAAACCCTGGCGGCTCCTTCTATCTTCCATTTAACATACTTTTGATAGCCTTCTTCAACTATTATTACACTTTCTTACAATTGGACCCTGATGATGTGAGCGAGCAATTGAAACGTCAAGGTGCTTCGATTCCGCTAGTCAGACCAGGCAGAAGTACAGCTACATTTATCAAAACAGTTCTTAGTCGAATATCAGTTCTGGGTTCAACATTTTTGGCTATTTTGGCTGCTGGTCCAGCTGTAGTTGAGCAGACCACACACCTGACTGCATTCAGGGGATTTGCTGGAACGTCTATTCTTATTCTTGTTGGTTGTGCAACAGACACAGCAAGAAAGGTTCAAGCTGAGATTATATCCCAAAAGTACAAGAACATAGAGTTCTATGACTTTGACAAGTATTGA 1626 0.4133 MLITVRDASSSSPLCFWLNRISTKPSVSRTPKTSICQASFSVQRRPNSARSWNTGHVSTSYEVANFDPLGINPSLSSALNCTWENLACLFSQTFESASSTDKEKPNSSRGVAAAIEDSSIDFGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGEAGRKKVLQYTRYASVGFAIVQAIGQVLYLRPYVNDFSTEWVLSSVILLTLGSVFTTYIGERITDLKLGNGTSLLIFTNIISYLPASFGRTIAQAFKDANYIGLVTIILSFFLLVVGIVYVQEAERKIPLNYASRFTSRSRGLEKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLSALKKAAVALNPGGSFYLPFNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGRSTATFIKTVLSRISVLGSTFLAILAAGPAVVEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1821 541 ProSitePatterns Protein secY signature 1. 185 204 IPR030659 -
Dod03g1821 541 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 53 539 IPR002208 GO:0015031|GO:0016020
Dod03g1821 541 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY1, CHLOROPLASTIC 53 539 - -
Dod03g1821 541 Gene3D SecY subunit domain 125 530 IPR023201 -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 258 283 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 414 436 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 226 249 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 184 204 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 134 152 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 469 487 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 503 521 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 284 307 - -
Dod03g1821 541 PRINTS Preprotein translocase SecY subunit signature 375 394 - -
Dod03g1821 541 Hamap Protein translocase subunit SecY [secY]. 122 534 IPR026593 -
Dod03g1821 541 Pfam SecY 186 517 IPR002208 GO:0015031|GO:0016020
Dod03g1821 541 SUPERFAMILY Preprotein translocase SecY subunit 126 524 IPR023201 -
Dod03g1821 541 ProSitePatterns Protein secY signature 2. 277 294 IPR030659 -
Dod03g1821 541 TIGRFAM 3a0501s007: preprotein translocase, SecY subunit 133 530 IPR002208 GO:0015031|GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1821 32 541 Chloroplast and Mitochondria Gene Families AT2G18710 82.422 0.0 850
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1821 K10956 - gmx:100810430 921.383