Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1818 ATGTCCGTGCCAAACCTCCGGAATTGCTTTCCTTCATATCTCATATTTCCCTGCTACCTCATACTATGCCTTGGACCATTACACTTGGTGGCCAAGAAGTTCATGATACCAATAGGGGTAGTTCTTGATTTGAACTCCCCAATTGGAAGTATGGCTAATAGTTGCATCTCGATGGCATATCATGACTTCTATAGACAGCATCCTCGTTTCCAAACCAGACTTGATCTTCGAATCAGAGACTCTGAGAGTGATGCTGTCACAGCAGCACACGCAGCTTCTGATTTAATCAATGAAAAAGTGCACACAATAATAGGACCTCTAAAGTCAGGACAAGCAAGGTATGTGATACAACTTGGGCGCGAACATGACGTGCCAGTCATCTCATTTTCCGCTACAAGTCCATCTCTTTCCCCAGCTCGCACCCATACTTTCATCCGAGCAGCACAAGATGATTGCTCTCAGGTCAAAGCCATAGCCGCTATTGTTAAAGCTTACGGCTGGCGTGAAATCGTCCTTATATACGAAGACACTGAATATGGCAATGGTCTCATCCCATATCTCACGGATGCCTTGGAAGCAGTTGACACAAAGGTGCTATACAGAAGCGTGATTGATCCCAATTCTCCCGAACACCAAATTTGGGAAGAGCTTAAAAATCTTAAGCACAAGCCAACAAGAATATTTCTGGTTCATATGGCGGCTGAACATGCGTCAAAGTTATTTTTAGCTGCGGAGAAAGCCGGAATGATGAGCGAAGGGTATGGATGGATTGTCACCGAAGGGCTGTCCGTTACTCTAGATCCGACAATGGCACACGTGATGGACTCCATGCAAGGTGTCCTGGGAGTGAGGCCAAAACTCAACAGCACTGAAAAGCTTGAGGACTTCAAGAGGAGATGGAAAGCTTTGCAGGTTAGAGAAACTATCAAGTCCCACCACTTGACCTTGTTCGGGCTGTGGGCTTATGACACTGTCTGGGCATTGGCTAACGCGGTAGAGGCTCAGATTTTAAACTCATCGCATGATACGAAGCATAATGTCACCCTCCTGACGACTGTGCTGGCCACGAAATTCCAAGGCATCTCTGGGTATTTCAATTTGACGGGAGGACAGCTGGAGCCGTCATCAGTGCTTGAAGTTTTCAACGTGGTTGGACTCAAAGAGAGGGTAATTGGATACTGGAGCCCAGAAAGAGGACTATTCCAAAAAGGCCAACCAAGTTTTGCCCAAGATTGGGAGAAACTGAAGCAACCGATTTGGCCAGGTGACACAACAGATCAGCCACCCAGGATGAGAATCGGAGTACCAGTAAGAAGGGGTTTCACTGAATTCTTAAAACTGGAAAGCAAGTCTCCCTACAGCACGGCCAAATTTTCCGGGTTCGTTATTGATTTGTTTTCAGAGGTTCTGAATGTTTTGCCTTTTCCCCTATCATACAAGTTCATCCCCTTGGAGAGCCCTACCTATGATGACTATCTTCACCAGATTAGTAACGGGAAGGTCGATGCGGTAGTGGGAGATGTAACAATTGTTTTTAATCGCACAAATTTTGTCGATTTCACGATGCCATATTGCGAATCAAGCGTATCAATGGTGGTTTCAATGAAGCAAGATCAGAGAAGAAACATGTGGATATTCTTAAAGCCTCTAAGTTGCGGTCTCTGGTTGACTACTGGTGCAGCCTTTGTGCTCACAGGTTTCGTCGTGTGGTTACTGGAGCACCGGTCAAATGCAGACTTTGGGGGTACCCCGCACCAACAACTTGGAATGATATTCTGGTTTTCCTTCTCAACACTTGTCTTTGCTCATAGGGAGAGACTACTGAGTAATTGGTCAAGATTTGTGCTGAGTGTATGGGTATTCGTGGTGCTCATCATAACGCAGAGTTACACAGCGAGTTTAGCTTCACTGCTGACAATAGAGAGCCTTCGACCTGCATTCATCGACATAAAAGATATAAAAACTAATAATTACTCAGTAGGATATCAGAACGCATCCTTCGTAAAGGAGCTTCTAATAAATCAATTAGGACTCAGTAAAAGCCAGTTGAAAGCCTATAATACCCCTGAAGAATATCATGAGGCGCTTTCAAGGGGAACCAATAATGGCGGTGTAGCGGCTATCTTTGATGAAACTCCCTACGTTAAGCTGTTCCTCAGTAAGTATGGAAGTAGTTGTGCTACTGTGGGACCGACTTATAAAACAGACGGATTTGGTTTTGCTTTTCCGCTAAAATCCTCCCTAGTGTCGTATTTTTCAAGGGCAATCCTGAATGTTACGGAAGACAAAGACAAGTTTGAAGGAATCAAGAACAAGTATTTCTCCACTGGGATCGGTGATCAAGGTGCCTCAATCACTTCAGACAGTGAAAGTCTAAAAGTGTATAGCTTTGCGGGTCTTTTCATCGTTACAGCAGTTGCTTCTTTGGTCTCGTTCCTGTTTTATTTGTTTAGTTTCTTATACTCCCAGTGGCCCACTTTGAGAACCATTCATTCTCAACAAACATCGTTTTGGTCGACGGTGATTGAAACGGTGAAGCATTTTGCCCGCCATGAAAGCAATTCGCACCCTTCAATGGGTAGAAGTGATTCCAGAGTACACGCCGAATCAAGTGCAGAGAGTTGA 2625 0.4476 MSVPNLRNCFPSYLIFPCYLILCLGPLHLVAKKFMIPIGVVLDLNSPIGSMANSCISMAYHDFYRQHPRFQTRLDLRIRDSESDAVTAAHAASDLINEKVHTIIGPLKSGQARYVIQLGREHDVPVISFSATSPSLSPARTHTFIRAAQDDCSQVKAIAAIVKAYGWREIVLIYEDTEYGNGLIPYLTDALEAVDTKVLYRSVIDPNSPEHQIWEELKNLKHKPTRIFLVHMAAEHASKLFLAAEKAGMMSEGYGWIVTEGLSVTLDPTMAHVMDSMQGVLGVRPKLNSTEKLEDFKRRWKALQVRETIKSHHLTLFGLWAYDTVWALANAVEAQILNSSHDTKHNVTLLTTVLATKFQGISGYFNLTGGQLEPSSVLEVFNVVGLKERVIGYWSPERGLFQKGQPSFAQDWEKLKQPIWPGDTTDQPPRMRIGVPVRRGFTEFLKLESKSPYSTAKFSGFVIDLFSEVLNVLPFPLSYKFIPLESPTYDDYLHQISNGKVDAVVGDVTIVFNRTNFVDFTMPYCESSVSMVVSMKQDQRRNMWIFLKPLSCGLWLTTGAAFVLTGFVVWLLEHRSNADFGGTPHQQLGMIFWFSFSTLVFAHRERLLSNWSRFVLSVWVFVVLIITQSYTASLASLLTIESLRPAFIDIKDIKTNNYSVGYQNASFVKELLINQLGLSKSQLKAYNTPEEYHEALSRGTNNGGVAAIFDETPYVKLFLSKYGSSCATVGPTYKTDGFGFAFPLKSSLVSYFSRAILNVTEDKDKFEGIKNKYFSTGIGDQGASITSDSESLKVYSFAGLFIVTAVASLVSFLFYLFSFLYSQWPTLRTIHSQQTSFWSTVIETVKHFARHESNSHPSMGRSDSRVHAESSAES* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1818 874 Pfam Ligand-gated ion channel 776 807 IPR001320 GO:0015276|GO:0016020
Dod03g1818 874 Gene3D - 543 683 - -
Dod03g1818 874 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 823 - -
Dod03g1818 874 Pfam Receptor family ligand binding region 55 372 IPR001828 -
Dod03g1818 874 SMART GluR_14 432 776 IPR001320 GO:0015276|GO:0016020
Dod03g1818 874 CDD GluR_Plant 430 774 - -
Dod03g1818 874 Gene3D - 157 320 - -
Dod03g1818 874 CDD PBP1_GABAb_receptor_plant 38 403 IPR044440 -
Dod03g1818 874 Pfam Bacterial extracellular solute-binding proteins, family 3 455 775 IPR001638 -
Dod03g1818 874 MobiDBLite consensus disorder prediction 852 874 - -
Dod03g1818 874 PIRSF IGluLR_plant 9 874 IPR017103 -
Dod03g1818 874 PANTHER GLUTAMATE RECEPTOR 35 823 - -
Dod03g1818 874 SUPERFAMILY Periplasmic binding protein-like I 36 395 IPR028082 -
Dod03g1818 874 Gene3D - 67 156 - -
Dod03g1818 874 Gene3D - 427 542 - -
Dod03g1818 874 SUPERFAMILY Periplasmic binding protein-like II 430 775 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1818 Dod-Chr3 29141704 29146588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1818 8 856 Ion Channels AT2G29110 41.975 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1818 K05387 - gmx:100799966 1086.63