Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1807 ATGGCCCTGCTTTGTGGTTCCGCTTCGGTGACGTTCCCTTCATCTTCATTCCCACCTAACAAGAATGCAACCCCCGCGAAATCATCCTCCTTCGTTGGCTTCCATTTGCCACTGCCAAAGCTTTCATCTTCTTCTATTCGACCTCATTTCCTTTCCAACTCCAAGGGACGAACAAGTCTCCATGTCCTTTGTCAGCAGCAGGACTCTTCCACCGTCCCACCAGAACAAGATCCACGCTTCATGTGCGTCGAACCCGAACCCCGATTCAAAGGCCCTGACATTTGGAACAAGACCTGGTATCCAAAAGCTGCAGATCACGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTACAGACAAAATTCTGGGGAGATTAGCGTCCACGATTGCTATTCATATCCGAGGGAAAGATCTAGTTACCTATACTCCCAGTGTTGACATGGGTGCCTTTGTAATTGTGGTGAATGCTGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAACTTTACAGGAGGCACTCTGGAAGACCTGGTGGTATGAAAGAGGAGACATTTGCCCAGCTGCAGAACAGAATTCCTGAAAGAATTATTGAGCATGCTGTTCGTGGCATGCTTCCGAAAGGGAGGCTTGGCAGGAAATTATTCACCCACCTGAAGGTTTATAAGGGCCCAGATCATCCACATGCTGCGCAGAAGCCCATCGAATTGCCAATAAGGGATAAAAGAATACAGTTTCAGAGATAG 750 0.472 MALLCGSASVTFPSSSFPPNKNATPAKSSSFVGFHLPLPKLSSSSIRPHFLSNSKGRTSLHVLCQQQDSSTVPPEQDPRFMCVEPEPRFKGPDIWNKTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKDLVTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKEETFAQLQNRIPERIIEHAVRGMLPKGRLGRKLFTHLKVYKGPDHPHAAQKPIELPIRDKRIQFQR* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1807 249 Hamap 50S ribosomal protein L13 [rplM]. 113 239 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 ProSitePatterns Ribosomal protein L13 signature. 203 225 IPR023563 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 PANTHER 50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE 65 249 - -
Dod03g1807 249 Gene3D Ribosomal protein L13 102 245 IPR036899 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 PANTHER RIBOSOMAL PROTEIN L13 65 249 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 CDD Ribosomal_L13 113 226 IPR005822 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 SUPERFAMILY Ribosomal protein L13 107 241 IPR036899 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 TIGRFAM rplM_bact: ribosomal protein uL13 107 238 IPR005823 GO:0003735|GO:0005840|GO:0006412
Dod03g1807 249 Pfam Ribosomal protein L13 111 229 IPR005822 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1807 115 248 Cytoplasmic Ribosomal Protein Gene Family AT3G07110 31.111 1.56e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1807 K02871 - gmx:100305981 385.956