Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1803 GATATGGCGACCAAATTGAATGCAGTGCTTGTGGGGATGATCGTCATTGGCCTCGTCTCAATGTCATCTGCCACATCTGGAACTGCCACTTATTACACTGTTTACGTTCCATCTGCATGCTATGGCTACCAAGACGAGGGAACGATGATCGCAGCGGCAAGCCAGGAAATCTATAACAACGGAGCTGCGTGTGGCCAAATGTATAGGATCACATGCACAGGTGCTACAAACCAAGGCCCTCAACCCTGCAAGAGTGGCAGTGTCACGGTGAAGATTGTGGACCTTTGCCCTTCACCAGGGTGCCAAGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTGCAATCGCTGATCTCAATGCTGGAAAAATTAACATTGACTATACCCCGGCCTGA 393 0.4911 DMATKLNAVLVGMIVIGLVSMSSATSGTATYYTVYVPSACYGYQDEGTMIAAASQEIYNNGAACGQMYRITCTGATNQGPQPCKSGSVTVKIVDLCPSPGCQGTFDLSQEAFSAIADLNAGKINIDYTPA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1803 130 SUPERFAMILY Barwin-like endoglucanases 15 129 IPR036908 -
Dod03g1803 130 Gene3D - 17 130 IPR036908 -
Dod03g1803 130 SMART dpbb_1 50 127 IPR007112 -
Dod03g1803 130 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 26 130 IPR007112 -
Dod03g1803 130 Pfam Lytic transglycolase 51 127 IPR009009 -
Dod03g1803 130 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 7 129 IPR044206 GO:0009627|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1803 Dod-Chr3 27797449 27798940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1803 41 127 Expansin Gene Family AT5G39260 37.634 1.07e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1803 - - ahf:112743758 203.756