Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1794 ATGGAAGCTAGTACTGGACTTTTTGCAGCGTCTCACGACAACAATGACCTTGTCGTCATTCAAGGACACGATGAGCCTACTAAGCCTGTGAAGAACTTAGACGGCCAGCTATGTGAGATATGTGGCGACTCAGTGGGACTTACTGTGGATGGAGACTTATTTGTAGCTTGTGAAGAATGTGGTTTCCCAGTGTGCAGGCCATGCTATGAGTATGAAAGAAGGGAAGGGACTCAAGTTTGCCCACAGTGCCATACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTGGAGGGAGATGAAGAAGAAGATGATGTGGATGATATTGAACATGAATTCAAAATGGAAGATGAAAAGGACAAGCTTCACAATGAAGTGATAAAGAAAGAGAAACAGAGCCGTGGAGATGACGATGTGGATTTGGCCAAGGTGAATGGGGAGCTACCCATATCATCCTACGGTACTGGAGATCCTGGCTATGCAAAATTGGATGACAAGGACAGAACAGATGACTGGAAGTTGAACCAAGGCAATCTATGGCCTGAAACTGATGCCTCAGTTGATCCTGAAAAGGCCGTAAAAGATGAATCTAGGCAGCCACTATCAAGGAAAGTACCAATACCATCAGGCAAACTGAGTCCTTACAGAATGATGGTTGCGGCTCGGCTTGTCATTCTGTTACTCTTCTTTCAGTACAGAATCTTCCATCCAGTACCTGACGCTATTGGACTCTGGTTCACATCTGTAGTATGTGAGATCTGGCTTGCATTGTCATGGTTGGTTGATCAGCTTCCCAAATGGTTTCCCATCAACCGCGAGACATACCTTGACCGTCTTTCAATCAGGTTTGAACCGGAGGACAAGCCTAATATGCTTTCTCCAATAGATGTCTTTGTCACTACCGTGGATCCAATCAAGGAGCCTCCTCTTGTTACAGCCAATACTGTTCTTTCAATCTTGGCCATGGATTATCCTGCTGACAAAATCTCATGCTACGTTTCTGATGATGGGGCTTCCATGCTCACCTTTGAAGCTCTTCAAGAAACTGCGGAATTTGCAAAGAAGTGGGTACCTTTCTGCAAGAAATTCTCAGTTGAACCTCGAGCACCAGAGAAATACTTCTCTGAGAAGATAGATTATATCAAGGATAAGCTTCAGTCTACATATGTAAAAGAACGTCGTACTATGAAGAGAGAATATGAAGAATTTAAGGTGAGGGTTAATGCACTTGTGGCTAAAGCCAAGAGAGTTCCTCCTGGAGGGTGGACTATGAAAGATGAGACACCATGGCCAGGAAACAACACCAGAGATCATCCAAGTATGATACAGATCCTTCTTCCTCGCGGCGTAGGCCACGAAGGTTACCAACTTCCATGTCTTGTCTACATGTCTCGCGAGAAAAGGCCAGCATTCCAACACCACAGCAAAGCTGGTGCTATTAATGCCTTGCTTCGCGTATCAGCTGTGCTAAGCAATGCTACTTTCGTACTGAACTTGGATTGCAACCATTATGTAAATAACAGCAAAACCGTGCACGAGGCCATGTGTTTCTTTATGGACATTCAACTTGGGAGCAGCATTGGCTTTGTTCAGTTTCCTCTAAGATTTGACAGCCTCGATAGGAATGATCGTTATGCCAACAAAAACAGTGTCTTATTTGATATTAACCTGAGGTGCCTGGATGGAATTCAAGGACCTGCTTATGTTGGTTCAGGATGTATCTTCAGAAGGAAAGCTCTATATGGATTTGATTGTCCAAAGGCCTCAAAACGCCCAAGAATAGTACAAGTGCACTCAAAACAGGATGAAAATGGAGAGGATGCAAGCATAACAGATGAAGACAAGCAGCTGTTGAAATCAACGATGAATTTTGAAAATAAGTTTGGAAAGTCTTCACTTTTTGTTAATTCTTCATTAACAGAAGAAGGTGGTATTGATGCTTCTTCAGGTCAGGCAGCCCTGCTTAAAGAAGCCATTAATGTCATGAGCTGTCGCTACGAAGACAGGACTCTGTGGGGATATGAGGTTGGTTTGAGCTATGGATCTATAGCAGCAGATACTCTTACAAGTTTCAAGATGCATAGTCGCGGTTGGAGATCTGTATACTGCATGCCAAAGAGGGCTGCATTCAGGGGTACAGCTCCTCTCAACCTCACAGATCGGCTTAACCAGGTGCTTAGATGGGCAGTGGGATCACTTGAGATCCTATTCAGCCGCCATTGCCCACTATGGTACGGCTTCAGCGAAGGAAAACTCAAGACTCTCCAGAGGATTGCCTATATTAACAGCACTGTCTACCCCTTCAGCTCCATACCCCTTCTGATATATTGTCTCGTTCCTGCCATCTGCTTGCTTACTGATAAATTCATCACTCCTTCGGTTGGCACTTTTGCAAGTCTAGTCTTTATCAGTCTGTTCATCTCGATCTTTGCGTCCGCCATTCTTGAATTGAGATGGAGTGGGGTAGGCCTTGAGGAATGGTGGAGAAATCAGCAATTCTGGGTCATTGGAAGCGTGTCTGCACACCTCTTTGCCGTTGTGCATCGCCTCATGAAGGCGCTGCCCCTGGCTAAGTTCAATATTGACTTGAACATTGTATCAAAGGCACCGGATGATGGAGAGTTTCGTGAACTGTACACCATTAAATGGACTGCACTCCTGATACCTCCAACCACGATCACAATAGTCAACCTCATTGGCATTGTCGCTGGGTTCACAGATGCCATAAACAGTGGTGAACATTCCTGGGGAGCACTGCTTGGGAAGCTCTTCTTTTCTTTGTGGGTTATCGTCCATCTGTACCCATTCCTTAAAGGTCTGATGGGTAGGCAAAACCGAACACCAACTCTTATAGTCATATGGTCCGTGCTCTTGGCTTCCATCTTCTCGTTGGTTTGGGTAAGAATTGACCCTTTTGTGCTGAAAACAAAGGGACCAGACGTCAAGCAATGTGGAATAAGTTGCTGA 2964 0.4491 MEASTGLFAASHDNNDLVVIQGHDEPTKPVKNLDGQLCEICGDSVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCHTRYKRIKGSPRVEGDEEEDDVDDIEHEFKMEDEKDKLHNEVIKKEKQSRGDDDVDLAKVNGELPISSYGTGDPGYAKLDDKDRTDDWKLNQGNLWPETDASVDPEKAVKDESRQPLSRKVPIPSGKLSPYRMMVAARLVILLLFFQYRIFHPVPDAIGLWFTSVVCEIWLALSWLVDQLPKWFPINRETYLDRLSIRFEPEDKPNMLSPIDVFVTTVDPIKEPPLVTANTVLSILAMDYPADKISCYVSDDGASMLTFEALQETAEFAKKWVPFCKKFSVEPRAPEKYFSEKIDYIKDKLQSTYVKERRTMKREYEEFKVRVNALVAKAKRVPPGGWTMKDETPWPGNNTRDHPSMIQILLPRGVGHEGYQLPCLVYMSREKRPAFQHHSKAGAINALLRVSAVLSNATFVLNLDCNHYVNNSKTVHEAMCFFMDIQLGSSIGFVQFPLRFDSLDRNDRYANKNSVLFDINLRCLDGIQGPAYVGSGCIFRRKALYGFDCPKASKRPRIVQVHSKQDENGEDASITDEDKQLLKSTMNFENKFGKSSLFVNSSLTEEGGIDASSGQAALLKEAINVMSCRYEDRTLWGYEVGLSYGSIAADTLTSFKMHSRGWRSVYCMPKRAAFRGTAPLNLTDRLNQVLRWAVGSLEILFSRHCPLWYGFSEGKLKTLQRIAYINSTVYPFSSIPLLIYCLVPAICLLTDKFITPSVGTFASLVFISLFISIFASAILELRWSGVGLEEWWRNQQFWVIGSVSAHLFAVVHRLMKALPLAKFNIDLNIVSKAPDDGEFRELYTIKWTALLIPPTTITIVNLIGIVAGFTDAINSGEHSWGALLGKLFFSLWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLVWVRIDPFVLKTKGPDVKQCGISC* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1794 987 Pfam Zinc-binding RING-finger 28 105 IPR027934 -
Dod03g1794 987 PANTHER CELLULOSE SYNTHASE 3 987 - -
Dod03g1794 987 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 283 390 IPR029044 -
Dod03g1794 987 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 449 584 IPR029044 -
Dod03g1794 987 SUPERFAMILY Nucleotide-diphospho-sugar transferases 306 798 IPR029044 -
Dod03g1794 987 MobiDBLite consensus disorder prediction 186 200 - -
Dod03g1794 987 SUPERFAMILY RING/U-box 23 108 - -
Dod03g1794 987 Pfam Cellulose synthase 294 592 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod03g1794 987 Pfam Cellulose synthase 600 981 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod03g1794 987 MobiDBLite consensus disorder prediction 172 201 - -
Dod03g1794 987 CDD mRING-HC-C4C4_CesA_plant 36 86 - -
Dod03g1794 987 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 21 111 IPR013083 -
Dod03g1794 987 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 3 987 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1794 Dod-Chr3 27389233 27394465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1794 1 987 Cell Wall Biosynthesis AT5G17420 64.729 0.0 1378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1794 K10999 - gmx:100777270 1677.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2155 05 47349299 47355721 Dod03g1794 03 27389233 27394465 PCT