Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1791 ATGGCAAGGAGTGGCCTGTTACATGTGCTAAAAGGAATGCATCACTTTTGTTTGAACAAGAAGAACATTCCAGTATTCACCAACATTACTTGCAACAAATACATTGTAGTGCTAAAACACGGGGGCCATACTTGGGAAGTGGAATTCACAAAGTATTGCAACAGGGAACTAGGAATGTTTGGTAAGGGTTGGGGAGAATTTCTTTCAGATATTATTGACTTGCATATGACTGATATATGCATCTTTGAGGTCATTGATAAGAACTTACCCAAATTGCAAGTGCATGTGTTTGAATCTGAAGGTGACAACATACCTACCCTACATCTGGTAGACTGA 336 0.3929 MARSGLLHVLKGMHHFCLNKKNIPVFTNITCNKYIVVLKHGGHTWEVEFTKYCNRELGMFGKGWGEFLSDIIDLHMTDICIFEVIDKNLPKLQVHVFESEGDNIPTLHLVD* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1791 111 CDD B3_DNA 35 97 IPR003340 GO:0003677
Dod03g1791 111 Pfam B3 DNA binding domain 30 99 IPR003340 GO:0003677
Dod03g1791 111 Gene3D - 7 100 IPR015300 -
Dod03g1791 111 SUPERFAMILY DNA-binding pseudobarrel domain 11 98 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1791 Dod-Chr3 27118809 27119697 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Dod03g1791 B3 9.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1791 - - egr:104452869 56.9954