Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1787 ATGGAGATTTTGGAGAAGAAACCAATCATGAACTATGGTATTTGGTTGCGGTATCAGAGTAGGACAGGGTACCACAACATGTATAAGGAGTACCGCGACACCACTCTTAATGGTGCAGTTGAGGCTATGTACAATGAGATGGCTTCTCGCCACAGGCCCGCGCCTGTGAAGGCTAGTTCCGGCGACCAACTCATGGCTGTGAAAGGCCGTTCCGGCGATCGACCCGTGACCGTGAAAGCCCCGTGA 246 0.5244 MEILEKKPIMNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEAMYNEMASRHRPAPVKASSGDQLMAVKGRSGDRPVTVKAP* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1787 81 Gene3D - 5 59 - -
Dod03g1787 81 SUPERFAMILY RplX-like 10 52 - -
Dod03g1787 81 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 3 52 IPR023573 GO:0003735|GO:0005840|GO:0006412
Dod03g1787 81 PANTHER 60S RIBOSOMAL PROTEIN L18A 2 52 IPR028877 -
Dod03g1787 81 MobiDBLite consensus disorder prediction 51 81 - -
Dod03g1787 81 PANTHER 60S RIBOSOMAL PROTEIN L18A 2 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1787 Dod-Chr3 26938611 26943074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1787 2 52 Cytoplasmic Ribosomal Protein Gene Family AT3G14600 84.906 3.03e-27 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1787 K02882 K22683 atr:18424119 100.523