Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1785 ATGTTTGACTGTGGACACAAGTCGCAATTCTTGGGTGGCCAGCGGGAAAAATTTGTGAGGTTGGATGACTTGGACTCTAGACTATCTTCATCTTCTGATGCTGGAGCTAAAGCCAGTGGATTTAGTATTGATAAATTAAGCCATGGTGGCCATGGAAGCAGTGCAACCTCTAGGTCTTTTAAAAGAGGAATGAAAAAGGGATCTGAAGGACTGAAGTCAATAGGTCGATCACTTGGATTTGGTGTATCTAAGGCAGTGTTTCCAGAGGATCTTAAAGTTTCAGAAAAGAAGATATTTGACCCTCAAGACAAATTTTTGCTCTTGTGGAATAAGCTTTTTGTTATCTCATGCATTTTGGCTGTGTCTGTGGATCCACTGTTTTTTTATCTTCCTGTCGTCAATGATTCAGTAAACTGTCTTGGTATTGACCGAAAGTTGGCAGTCGTAGTTACTACCTTGAGAACAGTTATTGATGCTTTCTATCTTATGCATATGGCTCTTCAATTTCGTACTGCTTATATTGCTCCATCATCTCGTGTTTTTGGACGGGGTGAGCTTGTGATAGATCCAGCACAGATTGCCAAACGCTACTTACGGCGGTATTTCATCATTGATTTCTTATCAGTGTTACCATTACCACAGATTGTGGTTTGGAGATTTCTTCAGAGATCAAAAGGTTCAGATGTACTTGCAACAAAGCAGGCCTTATTGTTTATTATCTTGCTTCAGTACATTCCTAGATTTCTCCGGATGGTACCATTGACTTCAGAACTCAAGAGAACAGCTGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCGTATTATTTGCTTTTATTCATGCTTGCTAGTCATATAGTTGGGTCTTTTTGGTACTTTTTAGCTGTTGAACGCAATGACTCATGCTGGCAGAAAGCTTGTAGTGAGTCTACTGGCAAAGGGTGCAACAAAAATTTCTTGTATTGTGGCAACCAATACATGGTAGGTTATGGTGCCTGGAAGAATGGAAGTGAAGATATTTTCAAGTCAGAGTGCTCTGCGGATGATAATTCACCTTTTGATTATGGCATTTTCTCACAAGCCTTGTCATCTGGTATTATTTCATCTAAGAAGTTCTTCTCCAAGTACTGTTACTGTTTATGGTGGGGACTCCAAAATTTGAGCACACTTGGCCAGGGGCTTCAGACTAGCACTTACCCTGGGGAGGTTATCTTTTCAATAGCACTAGCCATATCTGGTCTTATCCTGTTTGCGCTTCTGATTGGTAACATGCAGACATATCTTCAGTCTCTTACTATTAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAGCAGTGGATGCATCATCGCTTACTCCCTCAAGATCTTAGAGAGCGTGTGAGACGATATGACCAATATGAGTGGTTGGCAACACGTGGTGTAGATGAAGAAAGTCTAGTTCAAAGTCTACCGAAGGATCTTCGCAGAGACATTAAACGTCACCTCTGTCTGGCTTTAGTGAGACGGGTTCCACTATTTGAGAGTATGGACGAGAGATTACTTGATGCCATATGCGAGAGACTGAAGCCATGTTTATTTACGGAGAGTACTTACATTGTCCGGGAGGGAGATCCAGTTGATGAAATGCTTTTCATCATTCGTGGTCGCCTTGAGAGTGTTACAACAGATGGTGGGAGGAGTGGATTTTTCAATCGCAGTTTTTTAAAGGAGACTGACTTCTGCGGGGAGGAGCTTTTAACCTGGGCACTAGATCCCAAATCTGGCTCAAACCTCCCATCTTCAACTCGAACAGTCAAGGCTTTAACGGAGGTTGAGGCTTTTGCTTTAATTGCTGAAGAGTTGAAGTTTGTTGCCAGTCAGTTTAGGCGCCTCCACAGCAGACAGGTTCAACACACCTTCCGCTTTTACTCTCAACAGTGGAGGACTTGGGCTGCATGCTTTATTCAAGCAGCATGGCGTCGGTATTGCAAAAGAAAAATTATGGAGCTTCGTCGAAAGGAAGAACCTGAGGAGTCAGAAGGAACTCGCAACAATGGCAGTGGTGGTTCACACAGTCTAGTTGCTACCTTATTGGCCTCTAGATTTGCAGCTAATGCTCTTCGAGGTGTACATCGTAATCGGAATGCTAAGAGTGCCAGGGAGTTGGTTAAACTGCAGAAACCTCCAGAGCCTGACTTTACTGCAGATGATGCTGATTAA 2205 0.4299 MFDCGHKSQFLGGQREKFVRLDDLDSRLSSSSDAGAKASGFSIDKLSHGGHGSSATSRSFKRGMKKGSEGLKSIGRSLGFGVSKAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVVNDSVNCLGIDRKLAVVVTTLRTVIDAFYLMHMALQFRTAYIAPSSRVFGRGELVIDPAQIAKRYLRRYFIIDFLSVLPLPQIVVWRFLQRSKGSDVLATKQALLFIILLQYIPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLFMLASHIVGSFWYFLAVERNDSCWQKACSESTGKGCNKNFLYCGNQYMVGYGAWKNGSEDIFKSECSADDNSPFDYGIFSQALSSGIISSKKFFSKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAISGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQDLRERVRRYDQYEWLATRGVDEESLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTESTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKETDFCGEELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKEEPEESEGTRNNGSGGSHSLVATLLASRFAANALRGVHRNRNAKSARELVKLQKPPEPDFTADDAD* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1785 734 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 12 731 - -
Dod03g1785 734 Pfam Ion transport protein 108 433 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod03g1785 734 CDD CAP_ED 507 638 IPR000595 -
Dod03g1785 734 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 731 - -
Dod03g1785 734 ProSiteProfiles cAMP/cGMP binding motif profile. 507 591 IPR000595 -
Dod03g1785 734 SMART cnmp_10 507 638 IPR000595 -
Dod03g1785 734 Gene3D - 111 432 - -
Dod03g1785 734 SUPERFAMILY cAMP-binding domain-like 436 626 IPR018490 -
Dod03g1785 734 SUPERFAMILY Voltage-gated potassium channels 100 429 - -
Dod03g1785 734 Gene3D Helix hairpin bin 435 498 - -
Dod03g1785 734 ProSiteProfiles IQ motif profile. 643 672 IPR000048 GO:0005515
Dod03g1785 734 MobiDBLite consensus disorder prediction 712 734 - -
Dod03g1785 734 Pfam Cyclic nucleotide-binding domain 529 617 IPR000595 -
Dod03g1785 734 Gene3D Jelly Rolls 505 625 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1785 Dod-Chr3 26893237 26905449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1785 11 731 Ion Channels AT5G57940 78.315 0.0 1156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1785 K05391 - gmx:100820202 1309.28