Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1777 ATGGGCACATTGACCGATTCCCTGTGGGTATGCGTGTTCTTGCCGTGGATGATGACCCAATTTGTCTCAAAGTGTTGGAGAACCTACTTCGCAAATGCCAGTACCAGGGTTCGTTACTTCTTTTTATTTGGTTTTTTGTTCTTTGATTCAGTAAAAGCCCCTGTGTGCCATAATTGTCCTCAACACGGAACGGCCTTGTGTTTTGGGAAATTTTGCTATTCTCCTCTTATGTTTTGCAATGAAACATTTACTACAACTAATCAGGCAATTGAGGCGCTGAAAATGTTGAGGGAGAACAGGAATAAGTTTGACCTTGTTATTAGTGATGTAAATATGCCTGACATGGACGGATTTAAGCTCCTTGAGCTGGTGGGAATTGAAATGGACTTACCCGTCATCATGTTGTCAGCACATAGTGACACAAAGCTGGTGATGAAGGGTGTTACATGTGGTGCATGTGACTACTTGCTGAAACCTGTTCGAATTGAGGAGCTCAAGAACATTTGGCAACATGTAGTCCGGAGGAATAGGGATCAGAATAAGGCTTCCAATGAGGAAAAGGCTCCTAATATTGCTGGGGAAGGAGGTCAAGGCTTTGGATCAGAACATGGTAGTGACCAGAATAAAAAACTTGGCAAAAAAAGAAAGGACCAAATTGAAGAAGATGACGACGATGGTGAAGGGAATGGAGAAGAGAATGACGACCCCTCAACGCAGAAAAAGCCTCGTGTAGTTTGGTCTGTTGAGCTCCATAGAAAATTTGTTGCAGCAGTTAATCAGCTGGGCCTTGAAAAGGCTGTCCCTAAGAAAATACTTGACCTAATGAACGTTGAAGGACTTACTAGGGAAAATGTAGCAAGCCATCTGCAGAAATATAGACTCTATCTGAAAAAGGCAACCCAGCAGGTTAGCATGGTTGCTGCATTGGGTAGTAATGATTCATACCTGCGAATGGGTTCAATAGATGGATATGGAGATTTTTGCGCCTCTACTGGAGCTGGAAGGATCTCAAGTGCCACATTACAATCATATGCCTCAAGTGGAATTTTTGGCAGGCTGAATTCCCCAGCTGGCTTGAGCCTCAGAGGCATTAGTTCTTCTGCGCTAATCCGTCCTGGTCAATCTCAAAACCTTAACAGCTCCTTGAACCCTCTTGGAAACATTCAGCCATCCATGTTTCCTGCAAATCAAAGCTCAAGTTTGTTGCAGGGAATCCCAACATCAATTGAGCTTAATCAGTCTAAGCAAAACAATTGTACAACCGGTATGACACAGCTAAATCAAGTTGATTGTGGTGGATTTACTGTTGCCTCTGGCTTTCAAGATAATAGGGCTACTACTGTTGGTAATGCGAACTGTTCTCTACCTTCTGCCTCAAGTAATCCTTTAATGTTACAAGGAACCTCACCACAAACACACAATTCAGGAGGATTCAGAAATCAGTCTTATGTTAGAGCGCCTTCTTTGGGCACGGAATCTTTTGATATTGGCATTTGTGGTTCTTCTAATTTATTGGACTATAATAGGTGTAATGAAAACTGGCCAAGTGCAACGCAGTTGTCTAAATTTCCTGCCAGTCCCTTGCCGATATGTGATGCCTTCGGTAATGATCCATTGCCTCCCCCTGCCATAAATGTTTCCAACTCAAGTACTCATATTGGTAACAGTCCAGCTGATTTTTCTTCCAGAATTGCAATTTCTGTTCCTTTGGAGGATACAATAAATGAGCTGCAATGCCAAGAAGGCTTAATTGGGAATATAATACAGCCTTCCAGTTACACAACACCACCACATAGGTGGCAAGAACATAAACTGGATTACAATCAAAACATGAGTCGGTCCTTCAATTCTGTAGATTCTCATGTTTCATCTAGCGGATTAGCAAGTCCTTTGGGGCGTAATTTGAACCAAACTAATACAAATTGCAGCAACAGAGTTGATGCATCTTTTGTTGGCCAACTGAGTGGGGCTTCCCCATCAATCACCCGTTGCACTGAAGTTGATGTAAGACTGAAGTCAAATGACACCTACATTTTGGAACAAATGAAGTCCCAAGATGGAATTATTCAGAATAATTTTGGTACCTTGGATGATATAATGGGTACAATCGTCAAAAGGGAGCCAAATGACTTGGCATTGATAGATGGAGAAATCGGATTGGATGCTTACCCTGTTGGATCGTGTATCTGA 2190 0.4228 MGTLTDSLWVCVFLPWMMTQFVSKCWRTYFANASTRVRYFFLFGFLFFDSVKAPVCHNCPQHGTALCFGKFCYSPLMFCNETFTTTNQAIEALKMLRENRNKFDLVISDVNMPDMDGFKLLELVGIEMDLPVIMLSAHSDTKLVMKGVTCGACDYLLKPVRIEELKNIWQHVVRRNRDQNKASNEEKAPNIAGEGGQGFGSEHGSDQNKKLGKKRKDQIEEDDDDGEGNGEENDDPSTQKKPRVVWSVELHRKFVAAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKKATQQVSMVAALGSNDSYLRMGSIDGYGDFCASTGAGRISSATLQSYASSGIFGRLNSPAGLSLRGISSSALIRPGQSQNLNSSLNPLGNIQPSMFPANQSSSLLQGIPTSIELNQSKQNNCTTGMTQLNQVDCGGFTVASGFQDNRATTVGNANCSLPSASSNPLMLQGTSPQTHNSGGFRNQSYVRAPSLGTESFDIGICGSSNLLDYNRCNENWPSATQLSKFPASPLPICDAFGNDPLPPPAINVSNSSTHIGNSPADFSSRIAISVPLEDTINELQCQEGLIGNIIQPSSYTTPPHRWQEHKLDYNQNMSRSFNSVDSHVSSSGLASPLGRNLNQTNTNCSNRVDASFVGQLSGASPSITRCTEVDVRLKSNDTYILEQMKSQDGIIQNNFGTLDDIMGTIVKREPNDLALIDGEIGLDAYPVGSCI* 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1777 729 ProSiteProfiles Response regulatory domain profile. 52 173 IPR001789 GO:0000160
Dod03g1777 729 PANTHER TWO-COMPONENT RESPONSE REGULATOR 79 710 IPR045279 GO:0009736
Dod03g1777 729 Gene3D - 237 299 - -
Dod03g1777 729 PANTHER TWO-COMPONENT RESPONSE REGULATOR 79 710 - -
Dod03g1777 729 Gene3D - 76 227 - -
Dod03g1777 729 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 241 294 IPR006447 GO:0003677
Dod03g1777 729 Pfam Response regulator receiver domain 84 167 IPR001789 GO:0000160
Dod03g1777 729 Pfam Myb-like DNA-binding domain 243 293 IPR001005 -
Dod03g1777 729 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 297 IPR017930 -
Dod03g1777 729 SUPERFAMILY Homeodomain-like 238 298 IPR009057 -
Dod03g1777 729 SUPERFAMILY CheY-like 83 181 IPR011006 -
Dod03g1777 729 MobiDBLite consensus disorder prediction 206 221 - -
Dod03g1777 729 MobiDBLite consensus disorder prediction 177 242 - -
Dod03g1777 729 CDD REC_typeB_ARR-like 84 173 - -
Dod03g1777 729 SMART REC_2 51 169 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1777 Dod-Chr3 26577178 26582463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1777 70 418 Response Regulator Gene Family AT2G25180 53.521 6.76e-105 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Dod03g1777 Response_reg 1.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1777 K14491 - gmx:100776075 976.081