Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1770 ATGGAGATTTCCAAATGCCTGTACATCAATCTTCTCGCCACTTTCATGTTCTCAGCGGCTTTAGTTTTGGCAACCGACCCTTATTCGGAGGCACTCCTGAGCCTAAAATCTGAGCTTGTAGATGATGATAACAGCTTGCATGACTGGGTAGTTCTCTCCGAAGGGAACTTAACTGGGAAATCCTATGCATGCTCTTGGTCCGGTATCAAGTGCAACAAGGACTCAACAACTGTGACTTCCATAGACCTGTCCATGAAGAACCTTGGGGGTGTAATGTCAGGGAAGCAATTTAGCGTCTTCACAGAGCTTGCTAGTCTCAACCTGAGCTACAACTTCTTCTCTGGTCAGCTCCCAGTGGAAATTTTCAACCTCACAGGCCTAACAAGCTTGGATATCAGCAGAAACAATTTCTCTGGTCACTTCCCAGGTGGAATTCCCAGCCTCCAAAATTTGGTTGTACTTGATGCCTTCAGCAACAGCTTTTCAGGGCCATTGCCTGCTGAATTCTCAAAGCTACAGTTTCTCAAGGTTCTTAATCTAGCTGGGAGTTACTTCGGCGGACCAATTCCATCTGAATATGGTTCTTTCAGAAGCCTGGAGTTTCTTCATCTTGCAGGAAATTCTCTCTCAGGAGACATACCCCCAGAACTTGGTAAGCTCAAAACAGTAACCCATATGGAAATTGGCTACAACTTCTATGAGGGTTTTATTCCACCCGAATTGGGTAACATGAGCCAGCTTCAGTATCTTGACATAGCAGGCGCAAATCTATCCGGCCCCATACCAAAGCAACTCTCCAATCTAACCAGTTTGCAATCACTTTTCCTGTTCAGGAACCAGCTCACAGGATCAATACCAAGTGAGTTCAGCAACATCAAGACTCTCACGGATTTAGATCTCTCTGACAACCTCCTTTCAGGGTCCATTCCAGAGAGCTTTTCAGAGTTAAAGAACCTAAGACTGCTAAGTCTGATGTACAATGACATGAGTGGCACTGTTCCCGAAGGCATTGCACAACTGCCATCCTTGGAAACTCTCCTCATTTGGAGCAATCGCTTCTCTGGATCACTCCCAAAGAGCTTAGGGAGGAACTCCAAACTCAAGTGGGTGGATGTCTCCACAAACAACTTGAATGGCAGCATCCCCTCCGACATTTGCGTGAGTGGGGTGCTGTTTAAGTTAATCCTGTTTTCAAACAAATTTACAGGTGACCTCTCCTCCATCTCCAACTGTTCTTCCCTCGTTCGCCTTCGCCTCGAAGATAACTCATTCTCAGGGAAGATCCTTTTGAAATTCAACCATCTTCCTGACATCTCATATGTTGACCTGTCCATGAACAATTTTGTTGGTGGGATTCCCTCAGATATTTCTCAAGCTACCCAACTTGGTTATTTCAATGTCTCCTATAATCTGCAATTAGGAGGCATCATCCCTGCACACACATGGTCTTTGCCCCTACTTCAAAATTTTTCAGCGTCTTCTTGTGGTATTTTAGGTGATCTTCCCCAATTTGAGTCCTGCAAATCAATATCAGTTATTGATCTAGACAGGAACAACTTATCTGGAACTATCCCAAACAGTGTTTCCAACTGCCAGGCTCTTGAGAAAATGAAGTTGTCCAAGAATAGTCTAACAGGTCATATACCTGACGAGCTTGCCAGTATCCCTGTTCTTAGTGTTATAGACCTGTCAAATAATCAGTTCAATGGCCCCATACCTGCAAAGTTTGGTAGTTCTTCGAGTTTGCAACTTCTCAATGTGTCTTTCAACCATATCTCCGGTTCAATACCAACAGGAAGGTCATTCAAAATGATGGGTAGCAGTGCATTTGTTGGCAACTCTGAGCTATGTGGAGCACCTCTGAGACCATGTCCTGATTCAGTTGGAATATTGGGGAGCAAGGGCACGTGGAAGCTCACACGTATTCTGCTACTCTCTCTGGGGTTGTTAGTAATCCTCCTAGGATTAGCTTTTGGAATAGTTTATTTCAGAAGGGGAATTAAAAGCCAATGGAAGATGGTCTCATTCGCTGGACTCCCGCAATTCACAGCAAATGATGTTTTGACAAGCTTGAGTGCCACAAAACCCACAGAAAATCAATCACCATCGCCATCACCTTTGGTTTCGAAGGCAGTTCTCCCAACAGGAATAACAGTTTTAGTTAAGAAGATTGAGTGGGAACAGAGAAGCATTAAGGTCATGTCAGAATACATAATGCGCCTAGGAAATGCAAGGCACAAGAATTTGATCAGACTACTGGGGTTTTGCCACAACCAGCAGCTAGTCTATCTTTTGTATGATTACTTGCCCAATGGGAATTTGACTGAGAAAATTGGAAGGAAATGGGATTGGGCAGCTAAATTCAGAACTGTAGTTGGAATTGCAAGGGGACTTAGCTTCCTTCACCATGACTGTTACCCTGCCATACCCCATGGAGACTTGAAATCATGCAACATCGTGTTTGATGAAAATATGGAACCCCATTTGGCTGAATTTGGTTTCAAACATTTGTTGAAGTTGAGAAAAGGCTCGTCTCCTACCACAACCAAGTGGGAACCAGAATACGATGAAGCCTTGAAAGAGGAACTCTGCATGGATGTATACAAATTTGGGGAGATGACTCTGGAAATTTTAACTAGCGGAAGGTTGACAAATGCAACAGCTAGCATACACAGCAAACCATGGCAGCTTCTTCTGAGGGAAATTTACGATGATAATGAAGTGAGTTCTGCCAGTTCACTGCAAGAGATAAAGCAGGTTCTTGAGGTTGCTATGCTTTGCACTAGAACCAGGTCATCCGATCGGCCATCCATGGACGATGCTCTAAAGCTTTTGTCAGGATTGAAGCCTATAGAAGATGACCGAGCTTCAAAAGAATGA 2880 0.4406 MEISKCLYINLLATFMFSAALVLATDPYSEALLSLKSELVDDDNSLHDWVVLSEGNLTGKSYACSWSGIKCNKDSTTVTSIDLSMKNLGGVMSGKQFSVFTELASLNLSYNFFSGQLPVEIFNLTGLTSLDISRNNFSGHFPGGIPSLQNLVVLDAFSNSFSGPLPAEFSKLQFLKVLNLAGSYFGGPIPSEYGSFRSLEFLHLAGNSLSGDIPPELGKLKTVTHMEIGYNFYEGFIPPELGNMSQLQYLDIAGANLSGPIPKQLSNLTSLQSLFLFRNQLTGSIPSEFSNIKTLTDLDLSDNLLSGSIPESFSELKNLRLLSLMYNDMSGTVPEGIAQLPSLETLLIWSNRFSGSLPKSLGRNSKLKWVDVSTNNLNGSIPSDICVSGVLFKLILFSNKFTGDLSSISNCSSLVRLRLEDNSFSGKILLKFNHLPDISYVDLSMNNFVGGIPSDISQATQLGYFNVSYNLQLGGIIPAHTWSLPLLQNFSASSCGILGDLPQFESCKSISVIDLDRNNLSGTIPNSVSNCQALEKMKLSKNSLTGHIPDELASIPVLSVIDLSNNQFNGPIPAKFGSSSSLQLLNVSFNHISGSIPTGRSFKMMGSSAFVGNSELCGAPLRPCPDSVGILGSKGTWKLTRILLLSLGLLVILLGLAFGIVYFRRGIKSQWKMVSFAGLPQFTANDVLTSLSATKPTENQSPSPSPLVSKAVLPTGITVLVKKIEWEQRSIKVMSEYIMRLGNARHKNLIRLLGFCHNQQLVYLLYDYLPNGNLTEKIGRKWDWAAKFRTVVGIARGLSFLHHDCYPAIPHGDLKSCNIVFDENMEPHLAEFGFKHLLKLRKGSSPTTTKWEPEYDEALKEELCMDVYKFGEMTLEILTSGRLTNATASIHSKPWQLLLREIYDDNEVSSASSLQEIKQVLEVAMLCTRTRSSDRPSMDDALKLLSGLKPIEDDRASKE* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1770 959 SUPERFAMILY RNI-like 80 403 - -
Dod03g1770 959 Pfam Leucine rich repeat 510 568 IPR001611 GO:0005515
Dod03g1770 959 Pfam Leucine rich repeat 270 328 IPR001611 GO:0005515
Dod03g1770 959 SMART serkin_6 648 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1770 959 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 1 950 - -
Dod03g1770 959 PANTHER UNNAMED PRODUCT 1 950 - -
Dod03g1770 959 SUPERFAMILY Protein kinase-like (PK-like) 708 945 IPR011009 -
Dod03g1770 959 Gene3D Ribonuclease Inhibitor 390 628 IPR032675 -
Dod03g1770 959 SUPERFAMILY L domain-like 391 624 - -
Dod03g1770 959 Gene3D Phosphorylase Kinase; domain 1 706 766 - -
Dod03g1770 959 Gene3D Ribonuclease Inhibitor 190 284 IPR032675 -
Dod03g1770 959 SMART LRR_typ_2 340 364 IPR003591 -
Dod03g1770 959 SMART LRR_typ_2 268 291 IPR003591 -
Dod03g1770 959 SMART LRR_typ_2 196 220 IPR003591 -
Dod03g1770 959 SMART LRR_typ_2 100 124 IPR003591 -
Dod03g1770 959 Gene3D Ribonuclease Inhibitor 285 389 IPR032675 -
Dod03g1770 959 Gene3D Transferase(Phosphotransferase) domain 1 767 958 - -
Dod03g1770 959 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Dod03g1770 959 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Dod03g1770 959 ProSiteProfiles Protein kinase domain profile. 647 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1770 959 Pfam Protein tyrosine and serine/threonine kinase 716 942 IPR001245 GO:0004672|GO:0006468
Dod03g1770 959 Pfam Leucine rich repeat N-terminal domain 30 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1770 Dod-Chr3 26460008 26464286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1770 10 946 Receptor kinase-like Gene Family AT5G51350 54.890 0.0 964
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod03g1770 PK_Tyr_Ser-Thr 3.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1770 - - aprc:113852384 1583.93