Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1769 ATGAATAATGCTTATTCTGGAAAGTTGTTAAGGTCTGAACGACAAAAAATTATAGGAGGAGTTGCTCGAGGAATTCTTTACTTACACGAATATTCTCGTCTTAAAGTTATACATCATGATCTTAAACCTAGTAACGTGCTATTAGATGAAAATATGAACCCCAAAATTTCAGATTTTGGTCTTGCTAGAATTATTGAAATAAATCAACAACAAGGATTTACCAATATGAATTGTGGGAACATTGGCATATTTGCCTAG 258 0.3217 MNNAYSGKLLRSERQKIIGGVARGILYLHEYSRLKVIHHDLKPSNVLLDENMNPKISDFGLARIIEINQQQGFTNMNCGNIGIFA* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1769 85 Pfam Protein kinase domain 8 78 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1769 85 Gene3D Transferase(Phosphotransferase) domain 1 2 85 - -
Dod03g1769 85 SUPERFAMILY Protein kinase-like (PK-like) 7 81 IPR011009 -
Dod03g1769 85 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Dod03g1769 85 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 11 82 - -
Dod03g1769 85 ProSiteProfiles Protein kinase domain profile. 1 85 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1769 85 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 11 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1769 Dod-Chr3 26416161 26421094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1769 12 79 Receptor kinase-like Gene Family AT4G23190 66.176 6.31e-26 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1769 Pkinase 1.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1769 - - gsj:114397380 118.242