Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1748 ATGTGTGTGCAGGACGCAGAGCAAGTTGAACAACAAGACAAGGATAATATGGTGGACAACAGAAGGAAGTCATGGCCTTTGCATTGTGGGCTTCTGCATACCCAGATGGACAACTGGGAAAATGGATCCTCTTTCAGACCTTCAAGTGACAGGATCAATGTTGAAAATTCATTTCCCCTGGGAAGTATATGTGAGGATGCAGTGGTTGCGGACAAGAAACAGAACCTGATGAACTTTGTCCCTGCTCTTCGGTCTGGAGAGTGGTCAGATATTGGAGAACGCCCTTACATGGAGGATACACACGTATGCATTGCGGATATGGCAAAGAAGTTCAATTACAAAGTACTCTCTGAGGAAGCTGTTTCCTTTTATGGTGTATTTGATGGACATGGAGGGAAGAGTGCTGCGCAATTTGTCCGTGATCATCTGCCAAAAGTGATTGTTGAGGATGTGAATTTTCCTTCGGAGCTTGAGAAGGTGGTCAAAAGGTCATTTATGGAGACAGATGCAATATTGGCAAAAAGATCCTTTCTTGAGTCTTCCCTCTCTTCTGGTACAACTGCTTTAACGGCAATTATAATTGGAAGATCTTTACTGGTAGCCAATGCCGGAGACTGCCGGGCTGTCTTGTCCCATCGTGGAAGGGCTAAAGAAATGTCCAAAGATCATAGGCCAAACTGCATCAAAGAAAGGAAGCGGATCGAGGCCCTTGGTGGGTTCATTGATGATGGTTACCTGAATGGTCAGTTAGGTGTCACTCGTGCTCTAGGTGATTGGCACCTTGAAGGAATGAAGGAAATAAGTGAACGAGGTGGACCACTAAGTGCTGAACCTGAACTTAAATTGATTACACTGACAAAAGGAGATGAATTCTTGATAATTGGCAGTGACGGAATCTGGGATTTTTTTAGTAGCCAAAATGCAGTAGATTTTGCTCGAAAGAGGCTTCAAGAGCATAATGATGAGAAACTATGCTGCAGAGAAATAGTGCAAGAAGCAATTAAGAGAGGATCAACAGACAACTTGACAGTTGTGATGGTGTGTTTTGGCTCGGATCCGCCGCCACCTTTGGTTGTAGAGAGGACAAGAGTCCAGAGAAGCATATCAGCTGAGGGACTTCAGAATCTTAGATGCCAGCTACAAGGATAA 1149 0.4439 MCVQDAEQVEQQDKDNMVDNRRKSWPLHCGLLHTQMDNWENGSSFRPSSDRINVENSFPLGSICEDAVVADKKQNLMNFVPALRSGEWSDIGERPYMEDTHVCIADMAKKFNYKVLSEEAVSFYGVFDGHGGKSAAQFVRDHLPKVIVEDVNFPSELEKVVKRSFMETDAILAKRSFLESSLSSGTTALTAIIIGRSLLVANAGDCRAVLSHRGRAKEMSKDHRPNCIKERKRIEALGGFIDDGYLNGQLGVTRALGDWHLEGMKEISERGGPLSAEPELKLITLTKGDEFLIIGSDGIWDFFSSQNAVDFARKRLQEHNDEKLCCREIVQEAIKRGSTDNLTVVMVCFGSDPPPPLVVERTRVQRSISAEGLQNLRCQLQG* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1748 382 ProSiteProfiles PPM-type phosphatase domain profile. 84 349 IPR001932 -
Dod03g1748 382 CDD PP2Cc 84 349 IPR001932 -
Dod03g1748 382 SMART PP2C_4 74 347 IPR001932 -
Dod03g1748 382 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Dod03g1748 382 PANTHER PROTEIN PHOSPHATASE 2C 1 370 IPR015655 GO:0004722|GO:0006470
Dod03g1748 382 SUPERFAMILY PP2C-like 76 350 IPR036457 -
Dod03g1748 382 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 370 - -
Dod03g1748 382 Gene3D - 62 352 IPR036457 -
Dod03g1748 382 Pfam Protein phosphatase 2C 96 341 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1748 Dod-Chr3 25861329 25865143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1748 44 382 PP2C-type Phosphatase Gene Family AT2G25620 55.202 1.28e-128 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Dod03g1748 PP2C 8.7e-70 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1748 K14803 - gmx:100813157 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2065 05 46585081 46588652 Dod03g1748 03 25861329 25865143 PCT