Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1731 ATGTCTCAAGAGTTGAAGGATGAGGGGAACAAGCTGTTCCAAAAACGGGATGTCCAAGGAGCTATTGTGAAATATGAGAAAGCCCTCAAGTTGCTTCCTAGAAATCACATAGATGTTTCTTACCTGCGGAGTAACATGGCTGCATGCTGCATGCAGATGGGACTTAGTGAGTACCCAAGGGCAATTCATGAATGTAATTTGGCTCTTGAAGTGACACCAAAATACAGTAAAGCTCTGTTGAAGAGGGCAAGGTGTTATGAGGCTTTAAATAGGTTGGATTTAGCACTGAGAGATGTTAGTGCTGTTTTGAAGATGGAACCAAGTAATATCATGGCACTGGAGATCTCAGAGAAGGTGAAAAAAGCGCTTCAAGAGAAAGGATTAATAGTAAATGACACAGAAATTGAGTTGCCTCCAGATTATGTGGAACCTCCTTATGCTTTGCCTCCCAAAAAAGTGGTCAAAGAGAAGACGCAGAAGAAGAAGAGCAAAAAGAGCAGCAAAGAGAAGGCAAAGGATTCCAATAAAATTGAAGAAAAGCATGCCGAGGAGAGATTGGAAGAGAAGAAAGTTGAGGACAGTGTTGAGGTAAATAAGGCTGAGGACAGTATTACAGAGAAGAAGGCTAACAAATCTAAAAAGAAGAAGGCCAAGGAAAAAGTTGATGAGAAGAAGGATGATGTTAAGGAGGTTGTCGAGGAAAACTGCAATGGTAGAAGGGAAGATATACCTAAGAAAACAGCAAAACTTGTTTTTGGTGAGGATATAAGATGGGCTGAGTTGCCTGTTAATTGTAGCCTCTATCAGCTGAGGGAAGTTATCCGTGACAGGTTCCCTAGCCTTGGAGCAGTTCTTGTCAAATACAGAGACCACGAAGGTGATTTGGTCACAATGACTTCTGATGAAGAATTAAAGTGGGCTGAAACAGGATCACATGGTTCTATCCGGTTGTACATAGTTGAAGCTAATCCTGATCAGGATCCATTCGTTGCTAAACTTAATGTGAAGGATGTGGGAAAGGTTGACATTGATAAAGCTTCTGAGAATGGTTGCATGGAAAAAACAAAGGAAATTATTAGCTCATCTTGCATCGAGGATTGGATAATTCAGTTTGCACAACTGTTCAAGAACCATGTTGGATTTGAATCTGACAGATATTTAGATTTTCATGAACTTGGGATGAAGCTCTATTCTGAGGCGATTGAGGAGACTGTTACAAGTGAAGAAGCACAAGCCCTGTTTGACATGGCTGGTGATAAGTTCCAAGAGATGGCAGCTCTTGCTTTGTTCAACTGGGGAAATGTGCATATGTCCCGGGCAAGGAAGAATGTATATTTTACTGCAGATTCTTCAAAACAACATATGCATGAACAAATTAAAAGTTCATATGATTGGGCACAGAAAGAATATAAAAAAGCTGGAGATAAGTATGAAGCAGCCATTAAAGTCAAGTCAGATTTTTATGAAGGCTATCTGGCGTTAGGGCAGCAGCAGTTTGAGCAAGCAAAACTTTCTTGGTATTATGCCCTCAGTAGCAATGTAGATTTAGCAACATGGCCCTCCACTGAGGTTCTTCAGCTTTACAACCATGCTGAGCATAACACGGAGAAAGGAATGCTGATATGGGAAGAATCAAAAGAGAAGCACTTGAGTGAAACCTCCAATCCGAAGGATATTAGATTACATTTGCAGAAGATGGGGTTGGATGGGCAATTTACAAATATATCATCAGATGATATTGCTGCGCAGGAAGCTAATATGAGGTCTCAAATAAATCTGCTGTGGGGTACCATGCTATATGAACGCTCCATTGTGGAATTCAAATTAGGGCTACCGGTATGGCACGAATGCCTGGAAGTTGCAGTCGAGAAGTTTGAACTTGCTGGGGCTTCTCCAACTGATATAGCTGTAATGTTGAAGAACCACTGTTCGAATAACACTTCTGTAGAGGGTCTAGGCTTCAAAATTGATGAAATAGTACAGGCATGGAACGAGATGTACGAAGCTAAGGAGTGGCAGAATGGAGTTCCATCATTTCGTTTGGAGCCATTATTAAGAAGGAGAGTGTCAAAAATTTATCATGCCCTCGAGCTTGCATGA 2100 0.4114 MSQELKDEGNKLFQKRDVQGAIVKYEKALKLLPRNHIDVSYLRSNMAACCMQMGLSEYPRAIHECNLALEVTPKYSKALLKRARCYEALNRLDLALRDVSAVLKMEPSNIMALEISEKVKKALQEKGLIVNDTEIELPPDYVEPPYALPPKKVVKEKTQKKKSKKSSKEKAKDSNKIEEKHAEERLEEKKVEDSVEVNKAEDSITEKKANKSKKKKAKEKVDEKKDDVKEVVEENCNGRREDIPKKTAKLVFGEDIRWAELPVNCSLYQLREVIRDRFPSLGAVLVKYRDHEGDLVTMTSDEELKWAETGSHGSIRLYIVEANPDQDPFVAKLNVKDVGKVDIDKASENGCMEKTKEIISSSCIEDWIIQFAQLFKNHVGFESDRYLDFHELGMKLYSEAIEETVTSEEAQALFDMAGDKFQEMAALALFNWGNVHMSRARKNVYFTADSSKQHMHEQIKSSYDWAQKEYKKAGDKYEAAIKVKSDFYEGYLALGQQQFEQAKLSWYYALSSNVDLATWPSTEVLQLYNHAEHNTEKGMLIWEESKEKHLSETSNPKDIRLHLQKMGLDGQFTNISSDDIAAQEANMRSQINLLWGTMLYERSIVEFKLGLPVWHECLEVAVEKFELAGASPTDIAVMLKNHCSNNTSVEGLGFKIDEIVQAWNEMYEAKEWQNGVPSFRLEPLLRRRVSKIYHALELA* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1731 699 SUPERFAMILY TPR-like 4 119 IPR011990 GO:0005515
Dod03g1731 699 PANTHER PROTEIN CLMP1 1 698 IPR044517 -
Dod03g1731 699 MobiDBLite consensus disorder prediction 168 209 - -
Dod03g1731 699 ProSiteProfiles PB1 domain profile. 245 322 IPR000270 GO:0005515
Dod03g1731 699 SUPERFAMILY CAD & PB1 domains 247 329 - -
Dod03g1731 699 SMART tpr_5 76 109 IPR019734 GO:0005515
Dod03g1731 699 SMART tpr_5 40 75 IPR019734 GO:0005515
Dod03g1731 699 SMART tpr_5 2 35 IPR019734 GO:0005515
Dod03g1731 699 CDD PB1 253 319 - -
Dod03g1731 699 Gene3D - 240 322 - -
Dod03g1731 699 Pfam PB1 domain 247 320 IPR000270 GO:0005515
Dod03g1731 699 ProSiteProfiles TPR repeat profile. 2 35 IPR019734 GO:0005515
Dod03g1731 699 Coils Coil 207 234 - -
Dod03g1731 699 ProSiteProfiles TPR repeat profile. 76 109 IPR019734 GO:0005515
Dod03g1731 699 Gene3D Tetratricopeptide repeat domain 1 129 IPR011990 GO:0005515
Dod03g1731 699 PANTHER PROTEIN PHOX3 1 698 - -
Dod03g1731 699 SMART PB1_new 245 322 IPR000270 GO:0005515
Dod03g1731 699 MobiDBLite consensus disorder prediction 140 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1731 Dod-Chr3 25244985 25247160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1731 6 109 Calmodulin-binding Proteins AT3G25230 31.034 6.18e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1731 - - gmx:100820306 1041.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2049 05 46440381 46441916 Dod03g1731 03 25244985 25247160 PCT