Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1727 ATGACGTCGCGTGCAGGGCATGGCGGCGGCGGCGGCGGTGGTGGGAGCAGTGGAGGGACACGTGTCGGTAAGTACGAGCTGGGTCGGACGCTGGGCGAGGGCAATTTCGCGAAGGTGAAGTTTGCGAGGAACACGGTGACCGGAGAAAATGTGGCCATGAAGATTCTGGACAAGGAGAAAGTCCTCAAGCACAAGATGATCGGCCAGATAAAACGAGAAATATCAACAATGAAATTGATTAGACACCCAAATGTCATACGTATGTATGAGGTGATGGCTAGCAAGACAAAAATATACATTGTGTTGGAATTTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGGAATGGGAGGTTGAAAGAAGATGAAGCTAGACAATATTTTCAACAGCTAATATGTGCAGTGGATTACTGTCATAGTAGAAGTGTTTCTCATAGAGACTTAAAGCCTGAGAACTTGTTGCTGGATGCTAATGGAGTGCTTAAAGTTTCAGATTTTGGATTGAGTGCCTTGCCTCAACAAGTTCGGGAAGATGGGCTGCTTCACACAACATGCGGTACGCCAAATTATGTTGCCCCAGAGGTGATCCACAACAAAGGTTATGATGGTGCAAAGGCGGATCTCTGGTCATGTGGCGTTATTCTTTTTGTTTTAATGGCAGGCTATTTGCCCTTTGAAGAAAACAACCTTATGGCTTTGTATAAAAAGATTTTCAAGGCCGAGTTCACATGTCCTCCATGGTTCTCTTCAAGTGCAAAGAAATTAATCAAAAGAATCCTTGATCCTAATCCTGCCACTCGGATTACATTTGCTGAAGTCATTGAGAATGAGTGGTTCAAGAAGGGATATAAGCCTCCTAAATTTGAGCAGGCTAATGTTAGTCTTGATGATATAAACTCTATTTTCAATGAATCAATGGATTCAAAAAATCTTGTTGTTGAGAGACGTGAAGAAGGGCCTGTGGCACCTGTGACCATGAATGCATTTGAGCTTATCTCTACATCCCAGGGCCTCAACCTTGGTAGTCTTTTCGAGAAGCAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCAAATGAGATCATTTCGAAAATTGAGCAAGCTGCAGCACCTCTGGGTTTTGATGTTAAAAAGAACAACTGTAAGTTGAAGATTCAAGGAGAAAAGACTGGACGTAAAGGTCATCTATCTGTAGCCACTGAGATCTTTGAGGTGGCCCCTTCACTTTGCATCGTTGAGCTGCGTAAGTCAGAGGGAGACACACTGGAATTTCTCAAGTTCTACAAGAATCTCTCTCCTGGGCTGAAAGATATTGTTTGGAAAGCAGAGCCTATCGATGAAGAAAAAGGTGCCTCTGCCTCCAGATAA 1386 0.4365 MTSRAGHGGGGGGGGSSGGTRVGKYELGRTLGEGNFAKVKFARNTVTGENVAMKILDKEKVLKHKMIGQIKREISTMKLIRHPNVIRMYEVMASKTKIYIVLEFVTGGELFDKIARNGRLKEDEARQYFQQLICAVDYCHSRSVSHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIHNKGYDGAKADLWSCGVILFVLMAGYLPFEENNLMALYKKIFKAEFTCPPWFSSSAKKLIKRILDPNPATRITFAEVIENEWFKKGYKPPKFEQANVSLDDINSIFNESMDSKNLVVERREEGPVAPVTMNAFELISTSQGLNLGSLFEKQMGLVKRETRFTSKCSANEIISKIEQAAAPLGFDVKKNNCKLKIQGEKTGRKGHLSVATEIFEVAPSLCIVELRKSEGDTLEFLKFYKNLSPGLKDIVWKAEPIDEEKGASASR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1727 461 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1727 461 CDD CIPK_C 328 443 - -
Dod03g1727 461 MobiDBLite consensus disorder prediction 1 20 - -
Dod03g1727 461 Gene3D Transferase(Phosphotransferase) domain 1 105 287 - -
Dod03g1727 461 CDD STKc_SnRK3 24 279 - -
Dod03g1727 461 SUPERFAMILY Protein kinase-like (PK-like) 22 298 IPR011009 -
Dod03g1727 461 Gene3D Kinase associated domain 1, KA1 322 447 - -
Dod03g1727 461 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Dod03g1727 461 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1727 461 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 19 452 - -
Dod03g1727 461 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1727 461 ProSiteProfiles NAF domain profile. 322 346 IPR018451 GO:0007165
Dod03g1727 461 Gene3D Phosphorylase Kinase; domain 1 15 104 - -
Dod03g1727 461 Pfam NAF domain 324 384 IPR004041 GO:0007165
Dod03g1727 461 PANTHER SERINE/THREONINE KINASE 19 452 - -
Dod03g1727 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1727 Dod-Chr3 25086210 25108920 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1727 20 455 CBL-interacting serine-threonine protein kinases AT1G01140 70.136 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dod03g1727 Pkinase 2.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1727 - - gmx:100788746 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g1989 05 45667720 45668409 Dod03g1727 03 25086210 25108920 PCT