Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1649 ATGGAAGGAAACTCTGCAATGAAAAAATTGCTGGTGGATGAGGAAAGGCCATGTGATAATAATAAAGATGCGCCGTACAAGACGGGGGAAACCTCCATTCATAATACTCTAGGATCTACTTGTCTCAGTTTGAGGCTGAACAACTCAGAAATGGCTCCCCAAAGAGAAGGACAGCCTCCAACCCAAATAGGCTTGCTGAGAATCAAGCTAGAGGAAGCAAAGAAGGAGAATCGGAATCTAAGAGCTATGGTGAATCAGATTAATGAATACTACACTGCTCTTCAGAGTCGCTTACTGTTGGCGATGCAGCAGCATCAACTATCGACATCACCTCGAAATAATCATGAATTGCAGGGAAACACACAAGATGTGGGTAAACCAGTATTATCCACCCGGCAGTTCTTAAATATCGGTGATCCTTCCCCGTCTGATGGCAGCACAAAAGAAGGGTTTGCCTCAGCGGAAAACTTCAAGGAAATAGGAAGAAACCTTGCATATATGCACAATGGTGAAGATGAAATCAATACCCAAGTAACATCTGAAGAGGCAAAACGCAAAGACGATCAAGCAATCGAGGTTTGCAGGAAAGCCAGAGTGTCCATAAGGGCACGATCAGATTTTTCCTTGATGGGTGATGGATGCCAATGGAGAAAATATGGACAAAAGACAGCAAAGGCCAACCCTTGTCCCCGCGCCTACTATCGTTGCAGCATGGGAACATCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTTTTGAGGACGAGACTGTTATCATCACAACCTACGAAGGGAAGCATAATCATCCACTCCCACCTGCAGCTAGACCATTGGCGAGCTCAACATCAGCAGCACTGAACATGTTCCTTTCTGGCTCAATCACAAGCTCACAGGGCACCACTTTATCAAATTCACTCCACTTCCCTTCATTATCTAGTTCACCCTCCACTGCAATTGCTACTTTCTCTCCTTCTGTATCATGCCCCACAGTGACATTGGACTTAACCCACCAAACCAATAACTCTTTGCAATTCCAGAAGGCGAATTCATTAGACCACAGCCAATCATTCACATTCCCTATTGTGCCATTGCATGGTCACAATACTAAGACACTTGAGGGGTTGTACTTGTCTTCTAAGGTTCCAATAATGATAGCCCCTGAAGAGAAAAGGCTTGACCTGGTTGATGTTGTCAGTGAAGCCATCACCACAGACCCTTCTCTCAAGGAAGCATTATTCGCGGCCATTTCCTCACTCAATGGAGTCTCTCAGGACATCAACAATACCCACAACCAATCAAGTAAGAGTGGTCATGACCATTGTTCAAAGATTCCTGCCATAGGACCTCAGCAGCCATACACCACTCACTTGAGTTAG 1374 0.452 MEGNSAMKKLLVDEERPCDNNKDAPYKTGETSIHNTLGSTCLSLRLNNSEMAPQREGQPPTQIGLLRIKLEEAKKENRNLRAMVNQINEYYTALQSRLLLAMQQHQLSTSPRNNHELQGNTQDVGKPVLSTRQFLNIGDPSPSDGSTKEGFASAENFKEIGRNLAYMHNGEDEINTQVTSEEAKRKDDQAIEVCRKARVSIRARSDFSLMGDGCQWRKYGQKTAKANPCPRAYYRCSMGTSCPVRKQVQRCFEDETVIITTYEGKHNHPLPPAARPLASSTSAALNMFLSGSITSSQGTTLSNSLHFPSLSSSPSTAIATFSPSVSCPTVTLDLTHQTNNSLQFQKANSLDHSQSFTFPIVPLHGHNTKTLEGLYLSSKVPIMIAPEEKRLDLVDVVSEAITTDPSLKEALFAAISSLNGVSQDINNTHNQSSKSGHDHCSKIPAIGPQQPYTTHLS* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1649 457 SMART WRKY_cls 210 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1649 457 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 16 433 IPR044810 GO:0003700
Dod03g1649 457 ProSiteProfiles WRKY domain profile. 205 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1649 457 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 16 433 - -
Dod03g1649 457 SUPERFAMILY WRKY DNA-binding domain 203 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1649 457 Gene3D WRKY domain 195 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1649 457 MobiDBLite consensus disorder prediction 425 457 - -
Dod03g1649 457 Coils Coil 63 90 - -
Dod03g1649 457 Pfam WRKY DNA -binding domain 212 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1649 Dod-Chr3 23018763 23031962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1649 46 418 WRKY Transcription Factor Family AT1G62300 36.829 8.80e-62 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g1649 WRKY 3.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1649 - - gmx:100781603 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1649 03 23018763 23031962 Dod05g2488 05 51167848 51171072 PCT