Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1640 ATGGATGGTGTCACTGTGAAGCTAGAGGCAGAAGAGGTTGCAGGAGGAGAAGGACAGAAAGACCAGATATTGGCTCTAGAATCTTCTCCTGCTGATGGAGTTAGCAGTACCAACATGGAGGGGGAACACCTGGTCCAGAACAACGTGGCTGATGGGTCAGAGATGCATCATCTCTCGGCAAACAAGTCATTGCCAGCATCTGAACTGAATGCTGTGGTTTTCAGTCTAAGTCAACTTACCATCTTCTATAATGGAAGTGTTTGTGTGTATGATGGAATCCCTGAAGAAAAGGTGCGCGAAATAATGCTCATTGCTGCTGCCACTGCTGCCAAGTCTACTGAAATGAAGAAGATTAGTACACAATCTCCATTTACTTCACCTGTTCCCACAAGGCCTTCTTCTCCACATGGAACCTCCAACAATGCTGCTTCACCTCAGTCACTCTGCAGGCTGCAAGAATTTCCAATTGCACGCAGACATTCTCTTCAAAGGTTTCTCGAGAAGCGACGAGACAGGCTGGGGAGCAAAGCCCCTTATCCTACCCCATCAACACCAAAAGTGGCTGACAACATAGAGAACAACTTCTGTGCTGATAATGCACCAGATTTGGTTTCCTTGAAACGATCAGAGGAGGAATTTCAGCCAACTGTCGCTGCTTCTTGA 663 0.4691 MDGVTVKLEAEEVAGGEGQKDQILALESSPADGVSSTNMEGEHLVQNNVADGSEMHHLSANKSLPASELNAVVFSLSQLTIFYNGSVCVYDGIPEEKVREIMLIAAATAAKSTEMKKISTQSPFTSPVPTRPSSPHGTSNNAASPQSLCRLQEFPIARRHSLQRFLEKRRDRLGSKAPYPTPSTPKVADNIENNFCADNAPDLVSLKRSEEEFQPTVAAS* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1640 220 Pfam tify domain 77 106 IPR010399 -
Dod03g1640 220 PANTHER DIVERGENT CCT MOTIF PROTEIN 36 198 - -
Dod03g1640 220 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 36 198 IPR040390 -
Dod03g1640 220 MobiDBLite consensus disorder prediction 117 144 - -
Dod03g1640 220 Pfam Jas motif 155 179 IPR018467 -
Dod03g1640 220 ProSiteProfiles Tify domain profile. 72 107 IPR010399 -
Dod03g1640 220 MobiDBLite consensus disorder prediction 169 190 - -
Dod03g1640 220 SMART tify_2 72 107 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1640 Dod-Chr3 22832597 22836741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1640 78 181 Tify Gene Family AT5G20900 53.982 3.31e-29 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod03g1640 tify 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1640 K13464 - gmx:100306045 276.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2469 05 51029131 51033850 Dod03g1640 03 22832597 22836741 PCT