Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1637 ATGACTCTTCCTTCAAGAAAAGAGTTATTTCTCACACCCACCATCACATTCATCTCCTTGCGGCTGCTGCTGCTGGTGGTGGTTCTTGGCTTGTGCACCCCGCTAGGTGCTGGCGCTCATACCCTGGGATCAGAGAGCCTCAAGGTTTCTCCTTCTGAATTCGTTGCCTCAGTGAGAGCTGTTGTTGACGTTTTGCAAGAGGTTACTTCCATTCTGTCCCAGTTCGGCAATGGCTTTGGTGGCTTTCGGGTCTCGAATGCCGTTTCTGACTGCGTCGATTTGCTTGACTTGTCCTCTGATGAGCTCGACTGGACTGTGTCCGCTACTCAGACTCCCCAAGGCAAGCATAACAGTACCGGGAACCTAAGCTCCGATTTGAGGACATGGCTAAGTGCTGCACTTGCTAATCCAGAGACATGCATGGACGGATTCGAAGGCACCAACAGCATTGTGAAGACTCTAGTGTCCACTGGCCTTGGCCAAATGATCTCGTTGGTGCAGCAGCTACTCACCCTTGTGAACCCTGGCTCGAATCACCACTTCCCCTTCTCCTCCGCCAGTGATGATGAGCAGGGCCAGTATCCTTCATGGGTCAAACCAGGGGAGAGGAAGTTGCTGCAAGCAAATGGTGGGGTTGCCGTGGATGCCGTGGTAGCCGCTGATGGGACAGGGAACTACACTAAGGTGATGGATGCAGTGAAAGAAGCACCTGAGTATAGCATGACGCGCTATGTGATATACATAAAGAAGGGTGTTTACAATGAGAACGTTGAGATCAAGAAGAAGAAGTGGAACCTCATGATGATTGGGGATGGCATGAATGCCACTTTCATCTCCGGTAATCGGAGTTTCGTTGATGGTTGGACCACATTCCGGTCAGCTACCTTTGCTGTCAGCGGTAGAGGATTCATAGCACGAGACATCACTTTCCAGAACACTGCAGGCCCAGAGAAGCACCAAGCAGTGGCACTAAGGTCAGACTCCGACCTCAGCGCCTTCTACCGATGTGGGATCTTTGGTTACCAAGATACCCTCTACGCCCACACCATGCGCCAGTTCTACAGAGAATGCAAAATCAGTGGCACCGTGGACTTCATCTTTGGGGACGCAGCTGCCCTTTTCCAAAACTGTCAAATACTTGCCAAGAAAGGCCTGCCAAATCAAAAGAACACCATAACTGCACATGGCCGAAAAGACCCTGACGAACCAACTGGCTTCTCCATCCAATTCTCCAACATCACTGCTGATTCTGACCTCATTCCCTCAGTTAACGGCACCCACACGTACCTTGGTAGGCCATGGAAGCCATATTCAAGGACAATAATCATGCAATCCTACATAAGTGACGTGGTGAGGCCAGAAGGGTGGCTAGAGTGGAATGGGGACTTTGCTTTGGACACATTGTACTATGCTGAGTACATGAATCAGGGGCCAGGAGCTGGGCTAGGTAACCGCGTGAAATGGCCAGGGTACCATGTGATGAATGATTCTAGCCAGGCTAGTAACTTCACCGTGACACAATTTATTGCGGGGAATCTGTGGTTGCCTTCAACTGGGGTAGTGTTTACTGCTGGATTGAGGGTTTAA 1587 0.506 MTLPSRKELFLTPTITFISLRLLLLVVVLGLCTPLGAGAHTLGSESLKVSPSEFVASVRAVVDVLQEVTSILSQFGNGFGGFRVSNAVSDCVDLLDLSSDELDWTVSATQTPQGKHNSTGNLSSDLRTWLSAALANPETCMDGFEGTNSIVKTLVSTGLGQMISLVQQLLTLVNPGSNHHFPFSSASDDEQGQYPSWVKPGERKLLQANGGVAVDAVVAADGTGNYTKVMDAVKEAPEYSMTRYVIYIKKGVYNENVEIKKKKWNLMMIGDGMNATFISGNRSFVDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSAFYRCGIFGYQDTLYAHTMRQFYRECKISGTVDFIFGDAAALFQNCQILAKKGLPNQKNTITAHGRKDPDEPTGFSIQFSNITADSDLIPSVNGTHTYLGRPWKPYSRTIIMQSYISDVVRPEGWLEWNGDFALDTLYYAEYMNQGPGAGLGNRVKWPGYHVMNDSSQASNFTVTQFIAGNLWLPSTGVVFTAGLRV* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1637 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 175 IPR035513 -
Dod03g1637 528 PANTHER PECTINESTERASE 48 526 - -
Dod03g1637 528 SMART PMEI_2 38 172 IPR006501 GO:0004857
Dod03g1637 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 55 174 IPR035513 -
Dod03g1637 528 ProSitePatterns Pectinesterase signature 1. 240 259 IPR018040 -
Dod03g1637 528 CDD PMEI-like_4 38 177 - -
Dod03g1637 528 TIGRFAM PME_inhib: pectinesterase inhibitor domain 48 156 IPR006501 GO:0004857
Dod03g1637 528 Gene3D - 213 528 IPR012334 -
Dod03g1637 528 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 48 526 - -
Dod03g1637 528 SUPERFAMILY Pectin lyase-like 212 525 IPR011050 -
Dod03g1637 528 Pfam Pectinesterase 215 512 IPR000070 GO:0030599|GO:0042545
Dod03g1637 528 ProSitePatterns Pectinesterase signature 2. 359 368 IPR033131 -
Dod03g1637 528 Pfam Plant invertase/pectin methylesterase inhibitor 56 156 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1637 Dod-Chr3 22779568 22783347 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1637 22 526 Carbohydrate Esterase AT3G43270 62.069 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1637 03 22779568 22783347 Dod03g1637 03 22779568 22783347 ECH