Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1636 ATGTCTCTTTTTTCTTCAACAAAACAACACCTGATGGCTTCCATGCCCACAACGACCACATTCACCTTGTTACTGTCAGTGGTGGTGTCTCTGTCCCTATGCACCCCATCTGGCGTTTCTGGCCACGCGGGGCTACTAGCGTGCCTCAAGGTTCCTCCTGTTGAATTCGCTGGCTCAGTGAGAAAAGCTGTTGACGTTTTGCGTGACGTTGCCTCAACACTGCGGCCAGATTTCAGCAACGGCTTTGCTGATTCTCGCCTCTCCAGCGTCGTTTCTGCGTGCCTCGAGTTGGTGGACATGTCGTCAGATGAGCTCAGCTGGGCGCTTTCCGCTATTGGGAGTCCCAAAGGAAAGCATTACAGTAGCGGGAACCTGAACTCTGATTTGAGAACATGGCTAAGTGCTGCACTTGCCCATACAGATACATGCATGGAGGGATTCGAAGGCACCCGTGGCAATGTGAAGGGTCTAATATCCAATTCCATTGGCAAAGTGAACTCATTGGTCCAGAAGCTCTTAACACAGGTGCATCCTATTTCGGTTAATCACATAACCACCAAACAGGGCCAATTTCCTTCATGGGTTGAACCAGGGGACAAGAATCTGCTGTTGGGAAGGAGGGTCCACGTGGATGCTGTGGTAGCTGCTGATGGGAGTGGGAACTACACTACTGTGATGGATGCAGTGCTAGCAGCACCAGAGTATAGAATGAAACGCTATGTGATACGCATAAAGAAGGGTGTTTACGAAGAGAACGTTGAGATCGGTAAGAAGAAGTGGAACCTTGTGATGATTGGAGATGGAATGCACGCTACCATTATCACCGGTAACTTGAGTCACCAACTCAATCTCACCACATTCAGGACTGCAACCTTTGCTGTAAATGCCATAGGGTTCATAGCACGCGACATTTCCTTCAGGAACACTGCAGGGCCCGAGAGGCACCAAGCAGTAGCACTAAGATCAGACTCTGATCTCTCCGTCTTCTACCGATGTGGGATCTTTGGTTACCAAGACAGCCTCTACGCCCACGCCTTGCGCCAATTCTACAGAGAATGCACAATCAGTGGCACGGTGGACTTCATCTTTGGGAGTGCCATTGCTGTGTTCCAAAACTGCACAATACTAGCAAAGAAAGGCTTGCCAAAACAAAAGAACACCATCACAGCTCAAGGTGGGAAAGACCCTAGCCGAACCTCTGGATTCTCCATCCAATTCTGCAACATTTCTGCAGATTATGACCTCTTACCCTCCATCAACGACACCCAAACGTACCTTGGAAGACCTTGGAAGCCATATTCCATAACAGTTTTCATGCAGTCTTACATAAGTGATGTGTTGAGGCCAGAAGGGTGGGTAGAGTGGAATGGTTCCTCATATTTGGACACATTGTACTATGGTGAGTTCATGAATTATGGACCAGGAGCTGGAGTAGCTAACAGGGTGAAATGGCCAGGGTACCATGTGATGAATGATTCTAACCAGGCTAGTAACTTCACTGTGACCAATTTGATTCTGGGTGATCTATGGTTGCCTTCGACAGGTGTGGCTTATACTCCTGGATTGTAG 1569 0.4857 MSLFSSTKQHLMASMPTTTTFTLLLSVVVSLSLCTPSGVSGHAGLLACLKVPPVEFAGSVRKAVDVLRDVASTLRPDFSNGFADSRLSSVVSACLELVDMSSDELSWALSAIGSPKGKHYSSGNLNSDLRTWLSAALAHTDTCMEGFEGTRGNVKGLISNSIGKVNSLVQKLLTQVHPISVNHITTKQGQFPSWVEPGDKNLLLGRRVHVDAVVAADGSGNYTTVMDAVLAAPEYRMKRYVIRIKKGVYEENVEIGKKKWNLVMIGDGMHATIITGNLSHQLNLTTFRTATFAVNAIGFIARDISFRNTAGPERHQAVALRSDSDLSVFYRCGIFGYQDSLYAHALRQFYRECTISGTVDFIFGSAIAVFQNCTILAKKGLPKQKNTITAQGGKDPSRTSGFSIQFCNISADYDLLPSINDTQTYLGRPWKPYSITVFMQSYISDVLRPEGWVEWNGSSYLDTLYYGEFMNYGPGAGVANRVKWPGYHVMNDSNQASNFTVTNLILGDLWLPSTGVAYTPGL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1636 522 Pfam Pectinesterase 211 508 IPR000070 GO:0030599|GO:0042545
Dod03g1636 522 ProSitePatterns Pectinesterase signature 2. 355 364 IPR033131 -
Dod03g1636 522 CDD PMEI-like_4 40 180 - -
Dod03g1636 522 SUPERFAMILY Pectin lyase-like 209 521 IPR011050 -
Dod03g1636 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 169 IPR035513 -
Dod03g1636 522 Gene3D - 206 522 IPR012334 -
Dod03g1636 522 SMART PMEI_2 39 179 IPR006501 GO:0004857
Dod03g1636 522 PANTHER PECTINESTERASE 52 521 - -
Dod03g1636 522 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 52 521 - -
Dod03g1636 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 178 IPR035513 -
Dod03g1636 522 Pfam Plant invertase/pectin methylesterase inhibitor 84 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1636 Dod-Chr3 22769798 22774136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1636 18 522 Carbohydrate Esterase AT3G43270 56.178 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1636 K01051 - gmx:100777500 696.812