Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1635 ATGGCTTCCTCATCTCATAAACTCTTCCTCCTTCTCCTTGCAATCTTCTTCTCTCATACTTGTGCTGTGAACTCCTCCAATGGTTCCACAACATTTCATGCCAGCCTCTCTTCCTTAAGATCTTTCTGCAGAACTACCCCACACCCAGAAGCTTGCTTCAATTCATTGAAGCTGTCCATCTCAATAAACATAAGTCCAAACATCATCAGCTACCTCCTTCAGTCCCTCCAAGTTGCAATATCCGAAGCCACAAAGCTATCTACTCTATTCCACAATGTTGGACACTCAAACATCATAGAGAAGCAAAGAGGAGCAATCCAAGACTGCAGGGAGCTTCACCAATCCACCTTGACTTCCCTAGAAAGATCATTATCTGGGATTCGTTCATCAAACTCTAGGAGGCTGGTAGATGCAAGAGCCTACCTCAGCGCAGCGCTAACCAACAAGAACACATGCCTAGAAGGCCTAGATACTGCTTCTGGCACCCTGAAGCCAGTGCTGGTGAATTCTGTGATCAACACTTACAAGCATGTGAGTAATTCCCTTTCAATGCTCTCTAAGCCAGGGATGAGTGCTCCCAAAGGCCTCAAGAACCGGCGCTTGTTGGGTGGTCCAACATGGCTCTCAGGCAAAGACCTTGGCTTCTTGCAAAGTTCAGATGCGGATGAATATGACCCAAATGAAATGCTTGTTGTGGCAACTGATGGAACTGGGAACTTTAGCACCATCACTGAAGCCATAAACTTTGCTCCAAATAACAGCTTGGTTAGGACAATAATCTTTGTCAAGGAAGGGGTTTACGAGGAAAATGTGGAGATCCCAAGTTATAAGACAAACATTGTTCTGCTTGGCGATGGAAGTGATGTCACTGTCATAACTGGTAACAAAAGCGTCGATGATGGCTGGACCACTTTCAGATCTGCAACTCTAGCGGTCTCTGGTGATGGCTTTCTGGCACGTGACATAGCGTTTGAGAACAGTGCAGGGCCAGAGAAGCACCAAGCAGTTGCCTTGAGAGTGAATGCAGATTTGACTGCTTTTTACAGGTGTGGCATTTATGGTTACCAAGACACTCTATATGTTCACTCCTTTCGACAATTCTACAGAGAGTGTGACATTTATGGGACCATAGATTTCATATTCGGGAATGCCGCAGTAGTTCTGCAAGAATGCAACATTGTGTCCAGAATGCCACTGCCGGGCCAATTCACTGTGATCACTGCACAGTCCAGAGATACCCCAGATGAGGACACTGGCATCTCAATGCAAAACTGCTCAATTATAGCCACAAATGATCTATATTCCAAGTCCAGCCACATCAAGAGCTACCTTGGTAGGCCATGGAGGGTTTATTCTCGAGTTGTTTATCTTGAGTCCTACATTGGTGACTTTATTGACCCAATGGGTTGGGCAAAGTGGTCTAATGATCAAGGCTTGGACACTTTGTATTATGGAGAGTATGGGAATTATGGACCTGGCTCTGGGACACATAATCGTGTGGAATGGGTTGGGTACCATTCAATGGATTACAATGATGCCTATAATTTCACGGTTTCTGAATTCATTACTGGAGATGCTTGGCTTGGGTCTACTTCCTTTCCTTATGATGATGGGATCTAA 1620 0.4519 MASSSHKLFLLLLAIFFSHTCAVNSSNGSTTFHASLSSLRSFCRTTPHPEACFNSLKLSISINISPNIISYLLQSLQVAISEATKLSTLFHNVGHSNIIEKQRGAIQDCRELHQSTLTSLERSLSGIRSSNSRRLVDARAYLSAALTNKNTCLEGLDTASGTLKPVLVNSVINTYKHVSNSLSMLSKPGMSAPKGLKNRRLLGGPTWLSGKDLGFLQSSDADEYDPNEMLVVATDGTGNFSTITEAINFAPNNSLVRTIIFVKEGVYEENVEIPSYKTNIVLLGDGSDVTVITGNKSVDDGWTTFRSATLAVSGDGFLARDIAFENSAGPEKHQAVALRVNADLTAFYRCGIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECNIVSRMPLPGQFTVITAQSRDTPDEDTGISMQNCSIIATNDLYSKSSHIKSYLGRPWRVYSRVVYLESYIGDFIDPMGWAKWSNDQGLDTLYYGEYGNYGPGSGTHNRVEWVGYHSMDYNDAYNFTVSEFITGDAWLGSTSFPYDDGI* 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1635 539 Gene3D - 225 539 IPR012334 -
Dod03g1635 539 Pfam Pectinesterase 230 525 IPR000070 GO:0030599|GO:0042545
Dod03g1635 539 Pfam Plant invertase/pectin methylesterase inhibitor 38 184 IPR006501 GO:0004857
Dod03g1635 539 ProSitePatterns Pectinesterase signature 2. 373 382 IPR033131 -
Dod03g1635 539 SMART PMEI_2 34 184 IPR006501 GO:0004857
Dod03g1635 539 PANTHER PECTINESTERASE 7 538 - -
Dod03g1635 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 187 IPR035513 -
Dod03g1635 539 PANTHER PECTINESTERASE 7 538 - -
Dod03g1635 539 SUPERFAMILY Pectin lyase-like 227 536 IPR011050 -
Dod03g1635 539 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 186 IPR006501 GO:0004857
Dod03g1635 539 CDD PMEI-like_3 41 188 - -
Dod03g1635 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1635 Dod-Chr3 22764542 22767571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1635 37 539 Carbohydrate Esterase AT2G26440 69.396 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1635 - - gmx:100776969 891.338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1635 03 22764542 22767571 Dod03g1635 03 22764542 22767571 ECH