Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1634 ATGGCATTCCAGGATTTCGACCTCATATCAGAACGGCGAAGACAGGAAAGGAAACAAAAGCTTAGGAGGAGGATCCTCATTGGCTCTGTGTCCACCATTCTCCTTGCATGCGTAATAGGCGCTGCAGCATTTGTTCTCGTCAATGTCGACGCTGACAACAACAAGAAGAAGTCCAACCATGAACTTCCCTCAGCATCCACCGACAGCAGAAACGTAGACCATTCATCCAAGATTGTGAAAATGGTATGTGGCCCCGCGGAGTACAAGAGCAAATGCGAAGGCCCACTTGACAAGGCAGTGTCGAAGGACCCCAGCCAGGCACAACCTAAGGATCTTCTCAAGCTCTCTATCAAACTTGCTCAGGATGAGGTCAACAATGCCTTCAACAAAACCGCTTCCATCAAGTTTGAGTCCGAAATGGACAAAGGAGCGTATGAAGATTGCAAGCAGTTGTTTGATGATGCCAAGCAAGAGCTGGGGTTCTCCAACTCAGAAGTTAGCACAGACGATTTGAAGAGGCTTCAGACAAAAGCTCCTGAACTCAATAACTGGCTGAGTGCAGTTATCTCTTACCACCAAACCTGCATCGACGGGTTCCCTGAAGGAGAACTGAAGAGCAAGCTTAAGGAGCTCTTCCAGGATTCCCAAGAATTTGTTAGCAACTCCCTTGCCATTGTGTCGACCATGTCCTCGTTCCTTTCAACAGCTCAATCGGATTCCACGCGTCACTTGCTTTCGGAGAAGAATGATAGCATTCCTGTCTGGATTGGCCCCGAGGACCGAAGGATGCTGAAGGCAGCAGATGACAAACCCACACCTAATGTCACTGTGGCAAAAGATGGTAGTGGGAACTTCAAAACCATCTCAGAAGCTTTGGCGGCCATCCCAGAAACATATAAAGGACGGTACGTGGTCTATGTTAAAGAAGGAACATATGATGAGACAGTGACGGTGACAAAGAAAATGGAAAATCTAACGTTGTATGGGGATGGATCTCAAAAGAGCATCATCACGGGTAGCAAAAATTTCGTTGATGGAGTCAGGACTTTCCAAACTGCAACCTTTGTGGCACTTGGAAATGGGTTCTTGGGCAAAGCAATGGGATTTAGGAACACTGCTGGCCCGGAAAAGCATCAAGCTGTGGCCGCCAGAGTGCAAGCAGATCGTGCAATGTTTGTTAACTGCCGATTTGAGGGCTACCAAGACACTCTATACGCCCAAACCCACAGGCAATTTTATCGTAGTTGTGTCATTACAGGCACAATTGACTTCATCTTCGGTGATGCAACTGCTATGTTCCAAAACTGCATCATAGTTGTTAGGAAACCAATGGAAAGTCAACAGAACACTGTAACCGCCCAAGGTAGATCCGACAAACAAGAGACCACTGGTTTTGTTCTGCAAAAGTGTGAGATAACAGCTGACGACACACTGGTTCCGGAGAAGGACAAAATCAAAAGCTACCTTGGTAGGCCATGGAAAGAGTACTCAAGAACCATCATCATGGAGTCCCAAATTGGGGACATAATTGACCCTGATGGATGGTTACCTTGGGCAGGAAACTTTGCTCTCAACACACTGTATTATGCTGAGTTCAACAACACAGGACCTGGTGCCAGCACCAAAGCCAGGGTCAGTTGGGCTGGCCACAAAGTCATTAACAAGCAAGAGGCTAGCAAGTTTACCACAGAGAACTTCTTGCAGGGGACATGGATCAGCGGCAGAGGCGTACCAGCTCAGATGGGCTTGTACAACTAA 1758 0.4744 MAFQDFDLISERRRQERKQKLRRRILIGSVSTILLACVIGAAAFVLVNVDADNNKKKSNHELPSASTDSRNVDHSSKIVKMVCGPAEYKSKCEGPLDKAVSKDPSQAQPKDLLKLSIKLAQDEVNNAFNKTASIKFESEMDKGAYEDCKQLFDDAKQELGFSNSEVSTDDLKRLQTKAPELNNWLSAVISYHQTCIDGFPEGELKSKLKELFQDSQEFVSNSLAIVSTMSSFLSTAQSDSTRHLLSEKNDSIPVWIGPEDRRMLKAADDKPTPNVTVAKDGSGNFKTISEALAAIPETYKGRYVVYVKEGTYDETVTVTKKMENLTLYGDGSQKSIITGSKNFVDGVRTFQTATFVALGNGFLGKAMGFRNTAGPEKHQAVAARVQADRAMFVNCRFEGYQDTLYAQTHRQFYRSCVITGTIDFIFGDATAMFQNCIIVVRKPMESQQNTVTAQGRSDKQETTGFVLQKCEITADDTLVPEKDKIKSYLGRPWKEYSRTIIMESQIGDIIDPDGWLPWAGNFALNTLYYAEFNNTGPGASTKARVSWAGHKVINKQEASKFTTENFLQGTWISGRGVPAQMGLYN* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1634 585 Pfam Pectinesterase 274 569 IPR000070 GO:0030599|GO:0042545
Dod03g1634 585 Pfam Plant invertase/pectin methylesterase inhibitor 78 225 IPR006501 GO:0004857
Dod03g1634 585 SMART PMEI_2 74 225 IPR006501 GO:0004857
Dod03g1634 585 Gene3D - 268 583 IPR012334 -
Dod03g1634 585 PANTHER PECTINESTERASE 14 583 - -
Dod03g1634 585 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 77 230 IPR035513 -
Dod03g1634 585 ProSitePatterns Pectinesterase signature 2. 418 427 IPR033131 -
Dod03g1634 585 SUPERFAMILY Pectin lyase-like 272 573 IPR011050 -
Dod03g1634 585 PANTHER PECTINESTERASE 14 583 - -
Dod03g1634 585 TIGRFAM PME_inhib: pectinesterase inhibitor domain 68 228 IPR006501 GO:0004857
Dod03g1634 585 CDD PMEI-like_3 82 231 - -
Dod03g1634 585 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1634 Dod-Chr3 22761303 22763812 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1634 1 585 Carbohydrate Esterase AT2G26450 50.243 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1634 - - gmx:100784679 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1634 03 22761303 22763812 Dod03g1634 03 22761303 22763812 ECH
Dod05g2460 05 50939609 50942330 Dod03g1634 03 22761303 22763812 PCT