Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1633 ATGAGAACAACAAAATTTGTGATGACCCTTTTACTATTAGGATGTGCTCTGACAAGGGTCCCCATGTCAGAAGGAGCCGTAGATGGTTACCCGGAGCATGCTCACTATGATTGCAATCTTACCAGGTATCCTAATCTATGTGTTAAAACCTTGATGGAATTGAGTTCAGGGAATCAAAATGCTGATATCATTTCAGCTCTTGTTAACAAAACCATAATTGAAACCAACTTGCCAAGTTCATATTTTGCTGCATTCGAGACCCAGGATTCTCAACAAGCCCGTTCTGTCTCAGCAGGTTACTGCGAAGAGCTAATGGGCATGTCACTGAAGAGGCTTGACCAATCCCTGAAAGCACTGAAAGCCCCAAGAAAAAACAAGAACGACATCCAAACATGGCTAAGTGCATCTATAACTTTCCAACAAACTTGTAAAGACCATGCAGAAGCACACAGCTCTAATAAACTCTCTGGGGCAGGTGGCCTCATGGAAAGGATGTCCAAGAAGATGGACTATCTTTCTGAATTGGGAAGCAACCCATTAGCTCTTGTCAACAGGATCATCACCAGCCACACAGCAGTTGGTGGCGGCAGTGAAAAGGAACAGGAAATTCCCAAATGGGTATCGGCCAAAGGAAGAAAACTGCTTCAGGGAGCCACCATAAAAGCAAATGCAGTAGTTGCACAAGATGGCTCAGGAGACTACAAGACAGTCTCTGAGGCAATTAAGGCAGCATCAGGGAACCGGTTTGTGATTTATGTTAAGGAAGGGGTTTATAAGGAGAAGATTCGGACTAATAAGGACGGTATCACCTTGATAGGAGATGGCAAATATTCTACTGTCATTGCTTGGGATGACAGCCATGCCAAGGGAAAAAGCATGCCTGACTCGGCCACATTCACAATCACAGGTGATGGATTCATCGCAAGAGATATTGGTTTCCACAACAACGCTGGCCCTCAAGGCGAGCAAGCCTTGGCTCTAAACATAGCTTCTGATCGTTCAGTCCTCTACAGATGCAGCATAGCAGGGTACCAAGACACCCTCTACGCACTCGCGCTTCGACAGTTCTACAGAGAATGCGACATCTATGGCACCATAGACTTCATATTCGGTAACGCAGCTGCGGTTTTCCAGAGCTGCAACTTGCTTCTCCGTCGGCCTTCCCATGGCGGCTACAATGCCATTCTAGCAAATGGAAGAACTGACCTTGGTCAGAACACAGGGTTCTCTGTTCAAAAGTGTGCCATAACACCAAGCTCGGAACTCTCTCCTGTGAAGGACTCTTATAAGTCGTATCTGGGGAGGCCTTGGAAGCAATACTCCAGGGCAGTGGTGATGGAATCTACCATAGATGATGCAATTGCGGCTAGGGGTTGGATTGAGTGGCCTGGTTATGGAAGCTCAGTGCTGAAGACACTGTATTTTGCAGAGTATGCTAATGAGGGACCCGGTGCTGGAACTGCCAAGAGGGTTCAGTGGCCTGGTTTTCATGTTATTGGAGCTGAAGAGGCTGTCAAGTTCACTGTTGCTAGTTTTATTGCTGGAACTTCGTGGATTCCTTCCACTGGGGTCACTTTCATCTCAGGCCTTAATTAA 1596 0.4655 MRTTKFVMTLLLLGCALTRVPMSEGAVDGYPEHAHYDCNLTRYPNLCVKTLMELSSGNQNADIISALVNKTIIETNLPSSYFAAFETQDSQQARSVSAGYCEELMGMSLKRLDQSLKALKAPRKNKNDIQTWLSASITFQQTCKDHAEAHSSNKLSGAGGLMERMSKKMDYLSELGSNPLALVNRIITSHTAVGGGSEKEQEIPKWVSAKGRKLLQGATIKANAVVAQDGSGDYKTVSEAIKAASGNRFVIYVKEGVYKEKIRTNKDGITLIGDGKYSTVIAWDDSHAKGKSMPDSATFTITGDGFIARDIGFHNNAGPQGEQALALNIASDRSVLYRCSIAGYQDTLYALALRQFYRECDIYGTIDFIFGNAAAVFQSCNLLLRRPSHGGYNAILANGRTDLGQNTGFSVQKCAITPSSELSPVKDSYKSYLGRPWKQYSRAVVMESTIDDAIAARGWIEWPGYGSSVLKTLYFAEYANEGPGAGTAKRVQWPGFHVIGAEEAVKFTVASFIAGTSWIPSTGVTFISGLN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1633 531 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 186 IPR035513 -
Dod03g1633 531 SMART PMEI_2 30 182 IPR006501 GO:0004857
Dod03g1633 531 SUPERFAMILY Pectin lyase-like 218 529 IPR011050 -
Dod03g1633 531 CDD PMEI-like_3 38 186 - -
Dod03g1633 531 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Dod03g1633 531 Pfam Plant invertase/pectin methylesterase inhibitor 38 182 IPR006501 GO:0004857
Dod03g1633 531 Gene3D - 217 530 IPR012334 -
Dod03g1633 531 Pfam Pectinesterase 223 515 IPR000070 GO:0030599|GO:0042545
Dod03g1633 531 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 186 IPR035513 -
Dod03g1633 531 TIGRFAM PME_inhib: pectinesterase inhibitor domain 33 151 IPR006501 GO:0004857
Dod03g1633 531 PANTHER PECTINESTERASE 5 529 - -
Dod03g1633 531 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED 5 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1633 Dod-Chr3 22726405 22733307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1633 38 531 Carbohydrate Esterase AT5G53370 41.892 1.10e-125 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1633 K01051 - gmx:100795439 815.068