Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1620 ATGGAAGAGGGTGGAGACTCCAAAGCGACTGGAATTAGGCAGATTGTGAGGCTAAAGGGAATGCTTCAAAAGTGGCATGGTGTAACCATGGGTTCAAAACCTTCAAGTCCCGGTGCTGAGGCATCTGATGGGTGCACATCACCAATGTTGAACAAAAGGGGGAGAGGTGTTATGAGTTGTGACTCAGATGAGGAGGAAAGCTGCCAAGGCCCTGAACCACCACATGATGTTCCAAAAGGGTACTTGGCAGTCTATGTCGGCCCAGAGCAACGGAGGTTCATCATTCCCACCAGCCACCTTAGCCACTCCCTATTCAAAATGCTGCTGGAAAAGGCTGCAGAAGAATTCGGGTTTAACCAGAGTGGTGGCCTAACAATCCCATGTGAGATTGAGACCTTTAAATACCTCCTCAAGTGCATGGAGAACCAGAAAGAGCACCGTGATGGCAGCTCCTGTAACCGTCTAGCTCTTGGTGAAACTGCAGCTGGAAACTCAAACTTTGGAAGAGCAAATTAA 516 0.4884 MEEGGDSKATGIRQIVRLKGMLQKWHGVTMGSKPSSPGAEASDGCTSPMLNKRGRGVMSCDSDEEESCQGPEPPHDVPKGYLAVYVGPEQRRFIIPTSHLSHSLFKMLLEKAAEEFGFNQSGGLTIPCEIETFKYLLKCMENQKEHRDGSSCNRLALGETAAGNSNFGRAN* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1620 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 148 IPR003676 GO:0009733
Dod03g1620 171 PANTHER SMALL AUXIN-UP RNA-RELATED 7 148 - -
Dod03g1620 171 Pfam Auxin responsive protein 62 139 IPR003676 GO:0009733
Dod03g1620 171 MobiDBLite consensus disorder prediction 28 76 - -
Dod03g1620 171 MobiDBLite consensus disorder prediction 57 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1620 Dod-Chr3 22440537 22443570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1620 1 143 Calmodulin-binding Proteins AT3G43120 66.207 2.00e-68 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1620 K14488 - cpap:110808074 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1620 03 22440537 22443570 Dod03g1620 03 22440537 22443570 ECH
Dod05g2445 05 50758406 50760371 Dod03g1620 03 22440537 22443570 PCT