Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1612 ATGCAAACACATCTCCCACCCACTCTCTCCACTTTCCTCCTCCTCCTCCTGTTCACATCCCCAACATTTTTCTCGTGCATCACCGCATCAAAAGACAAGCGCAACAATGCGCAAGATCTGGTCCGTTCATCATGCGTCCACGCAAGGTACCCAACCCTCTGCCTCCGAACCCTCTCCAACTACGCTGGCCCAGCCAACACCCCTTTAGACGTGGCCCGGGCCGCCCTCAAGGTGAGCCTGGCCCATGCCCGCCGTACATCCCGATTCCTCAAATCACTCCAATCACCATCAGGCCCAGGCCCATTGGGCCAAAACAACAACAATATTAACAGCCCAAGCGCCAAGAGGCAGCGAGTTGCGCTGAGTGACTGTGTCGACCAGATGGCCGACTCAGTGGACGAGTTGAAGAGGAGCCTGGAGGAGCTCCAGCACCTCCGAACGGCGACGTTTCGGTGGCAGGTGAGTAACGCGCAGACGTGGGTGAGCGCCGCCCTCACCGACGGCGATACCTGCCTCGACGGGTTTGGAGACGGCGGCGACGGTTACGGGAAGGTTAGGAGGGACGTGAAGCAAAGGGTCACGGATGTGGCGAGGGTTACCAGCAATGCCTTGTATATGATCAACCGTGTTGGTGATGGTGGGGCCGGGAAGCCTAAGCATCGTTCTGCCGCATCAAGTTCCAAGAAGAACTGA 693 0.5815 MQTHLPPTLSTFLLLLLFTSPTFFSCITASKDKRNNAQDLVRSSCVHARYPTLCLRTLSNYAGPANTPLDVARAALKVSLAHARRTSRFLKSLQSPSGPGPLGQNNNNINSPSAKRQRVALSDCVDQMADSVDELKRSLEELQHLRTATFRWQVSNAQTWVSAALTDGDTCLDGFGDGGDGYGKVRRDVKQRVTDVARVTSNALYMINRVGDGGAGKPKHRSAASSSKKN* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1612 230 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 212 - -
Dod03g1612 230 CDD PMEI-like_3 43 209 - -
Dod03g1612 230 Pfam Plant invertase/pectin methylesterase inhibitor 39 205 IPR006501 GO:0004857
Dod03g1612 230 MobiDBLite consensus disorder prediction 209 230 - -
Dod03g1612 230 SMART PMEI_2 36 206 IPR006501 GO:0004857
Dod03g1612 230 MobiDBLite consensus disorder prediction 90 116 - -
Dod03g1612 230 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 210 IPR035513 -
Dod03g1612 230 TIGRFAM PME_inhib: pectinesterase inhibitor domain 12 209 IPR006501 GO:0004857
Dod03g1612 230 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 210 IPR035513 -
Dod03g1612 230 Coils Coil 125 145 - -
Dod03g1612 230 PANTHER PECTINESTERASE INHIBITOR 3 14 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1612 Dod-Chr3 22219319 22220786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1612 40 212 Carbohydrate Esterase AT3G14310 29.545 1.15e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1612 - - aip:107634498 259.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1612 03 22219319 22220786 Dod03g1612 03 22219319 22220786 ECH