Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1609 ATGGAAGTTAAGCCTATAGCTTTGAGGTTTGTTCTCCTTGTTGTAGTTTTGATTGATCTTCATGGACTCCCCTACAATGAGGCACTTAATGAGACTTGTGGTTCTCTCAGTAGAGAAGACACTGATGCACCATGCCCAACTGGTTGGGTTACGGACCCTAATAAGACAAAGTGCTATCTTCATGTTGGGAGGCCTCAATCTTGGAACGAATCAGAGATCTGTTGTAATAAGTATGGTGGGCATTTAGCATCACTGGTATCACTTCAGGAACTACCCTTTGATCAGAGTCTTTGTGATGGGTCTTTAAATAGTTGCTGGATTGGTGGAAGAAGGCTCAACTCTACTTCTGGTTATCAGTGGATTTGGTCTGACAATTCTCAGTGGAACAATTCCATATTCCCCAATGTTCCAGTCAATTGTACTCGACAACCCTGTCATATGAACAGTACAGACAATTTATGTGCAGCATTGGCCAATAATTCAAAATCTCTCATGAGTGAGAGATGTGACAATCCTCATGCTTCTGTATGTGTACTTGATATAGATAGGAACTGTAACCATATGCACTGCCACAGGGAATACCTCATCATCCTTGCTGTGGTGAGTGCGTTGATACTGTCCACAACATTAGCAGTGGTGGTTTGGCTTCTTGTACACAAGCGGGGCAAGAAAAGAAGAAGGTCTAGAAAACTATCTGATCCAGCAGCTTCTCTTCCATCATGGAAAGTCTTTACCAAAGATGAATTAAGGTCTATTACAAAGAATTTCAGTGAAGGTAACCGTCTTGTCGGGGATGCCAAGACTGGTGGTACATACAGTGGGGTCCTACCAGATGGCTCAAAGGTTGCAGTTAAGAGATTAAAGAGGTCAAGCTTTCAGAGGAAAAAAGAGTTCTATTCAGAAATTCGCAGGGTTGCAAGGCTTCGCCATTCAAATCTAGTGGCTGTGATGGGGTGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGCTAATGGGCCCTTAGATAAATGGCTACATCACATACCAAGGGGAGGTCGCAGCTTAGATTGGGCCATGAGGATGAAAATTGCCACAACGCTTGCTCAAGGAATTGCGTTTCTGCATGACAAGGTTAAGCCTCAAGTTGTGCATCGAGATATACGTGCCAGTAATGTACTGCTAGATGAGGATTTTGGAGCACACCTCATGGGTGTTGGTCTGTCTAAGTTTGTGCCATATGAAGCAATGCACGAGAGGACGGTGATGGCAGGTGGAACCTACGGATATCTTGCACCGGAGTTTGTGTATAGAAACGAGCTAACAACAAAGAGTGACGTTTATAGTTTTGGTGTCCTACTACTTGAAATAGTGAGCGGACGCAGACCTGCACAGGCAGTTGATTCTGTAGGTTGGCAGAGTATATTTGAATGGGCAACGCCTCTTGTGCAAGCTCATCGCTATCCTGAACTCTTGGATCCTCATATATCTTCCTCGTCTTCAAGTATCATCCCAGAGGCTAGTACCATCCAGAAGGTGGTTGATCTTGTCTATTCATGCACACAACATGTCCCATCCATGCGCCCTAGAATGTCTCATGTTGTTCATCAGCTACAACAATTTTCTCAGCCACCTGCAAAGTAA 1632 0.4406 MEVKPIALRFVLLVVVLIDLHGLPYNEALNETCGSLSREDTDAPCPTGWVTDPNKTKCYLHVGRPQSWNESEICCNKYGGHLASLVSLQELPFDQSLCDGSLNSCWIGGRRLNSTSGYQWIWSDNSQWNNSIFPNVPVNCTRQPCHMNSTDNLCAALANNSKSLMSERCDNPHASVCVLDIDRNCNHMHCHREYLIILAVVSALILSTTLAVVVWLLVHKRGKKRRRSRKLSDPAASLPSWKVFTKDELRSITKNFSEGNRLVGDAKTGGTYSGVLPDGSKVAVKRLKRSSFQRKKEFYSEIRRVARLRHSNLVAVMGCCYDHGDRYIVYEFVANGPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPQVVHRDIRASNVLLDEDFGAHLMGVGLSKFVPYEAMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSIIPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQFSQPPAK* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1609 543 Gene3D - 24 180 IPR016186 -
Dod03g1609 543 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 539 - -
Dod03g1609 543 SUPERFAMILY C-type lectin-like 37 180 IPR016187 -
Dod03g1609 543 Gene3D Transferase(Phosphotransferase) domain 1 333 539 - -
Dod03g1609 543 ProSitePatterns Tyrosine protein kinases specific active-site signature. 379 391 IPR008266 GO:0004672|GO:0006468
Dod03g1609 543 ProSiteProfiles Protein kinase domain profile. 257 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1609 543 SUPERFAMILY Protein kinase-like (PK-like) 230 535 IPR011009 -
Dod03g1609 543 SMART tyrkin_6 269 534 IPR020635 GO:0004713|GO:0006468
Dod03g1609 543 PANTHER - 1 539 - -
Dod03g1609 543 Gene3D Phosphorylase Kinase; domain 1 232 332 - -
Dod03g1609 543 CDD CLECT 57 177 - -
Dod03g1609 543 SMART CLECT_2 45 178 IPR001304 -
Dod03g1609 543 ProSiteProfiles C-type lectin domain profile. 54 178 IPR001304 -
Dod03g1609 543 Pfam Protein tyrosine and serine/threonine kinase 272 534 IPR001245 GO:0004672|GO:0006468
Dod03g1609 543 Pfam Lectin C-type domain 65 178 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1609 Dod-Chr3 22143194 22148000 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1609 75 540 Receptor kinase-like Gene Family AT1G52310 71.429 0.0 668
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Dod03g1609 PK_Tyr_Ser-Thr 6.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1609 - - vra:106762676 903.664