Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1598 ATGTCGAGTTCATCGGAGTATTCTGAATTTTCCGGCCAGAAACCGGCAAGGTCGCCGGAAAAATCGACGTTCTCTCAGACTTGTAGTCTGTTGAGTCAGTACATCAAGGAAAAGGGTAGCTTCGGAGATCTCAGCCTCGGAATCACATGCAACACCGAAACAAGTGGGTCACCTGAGACATCTTGTCAATCTGCAACAACCATGAACTTGTTTCCTACCAAGGAAAACAACGTGACACCAAAGAACCTGACAGCTATGGATTTGCTCTCTCCACAAGCTCCAACCTTGATCAATTCCAGTGCAATTAAGTCTGTGAGCAAGGGGCCTAAGGCTGCACAATTGACGATCTTCTACAATGGAAAGGTTATTGTATTTGATGATTTTCCAGCTGACAAAGCGAATGAGCTTATGGCTTTTGCTAGCAAGGGAATCTCTCAGAACCAGAACAGCTCTGCCTACACTTACACTCAGAGCCAGCCTTCTTTTCCTCCTAATTTGGCCAGAACATCTGCTGATCCGAGCACTCCGGTTTTTCCCAACGTGAATATCGTCCCTAGCACCGGTGCCGGTTCGATCCACGAGCACCCTAAAGCACCAACCAGACCTGTTGTTTGTGATCTGCCAATTGCCAGGAAAGCCTCACTTCATCGGTTCCTGGAGAAGAGAAAGGATAGAATCGCTTCCAAAGCTCCATATCAAGCACCAAATTCCGTGGGGGCCGCTGATAAACCTGCTGAATCCATGGCATGGCTAGGGTTGGGTGCTAAATCACCTCAAAATTGA 783 0.4764 MSSSSEYSEFSGQKPARSPEKSTFSQTCSLLSQYIKEKGSFGDLSLGITCNTETSGSPETSCQSATTMNLFPTKENNVTPKNLTAMDLLSPQAPTLINSSAIKSVSKGPKAAQLTIFYNGKVIVFDDFPADKANELMAFASKGISQNQNSSAYTYTQSQPSFPPNLARTSADPSTPVFPNVNIVPSTGAGSIHEHPKAPTRPVVCDLPIARKASLHRFLEKRKDRIASKAPYQAPNSVGAADKPAESMAWLGLGAKSPQN* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1598 260 MobiDBLite consensus disorder prediction 150 172 - -
Dod03g1598 260 SMART tify_2 107 142 IPR010399 -
Dod03g1598 260 Pfam Jas motif 208 233 IPR018467 -
Dod03g1598 260 PANTHER PROTEIN TIFY 10A 17 254 - -
Dod03g1598 260 Pfam tify domain 109 141 IPR010399 -
Dod03g1598 260 MobiDBLite consensus disorder prediction 1 23 - -
Dod03g1598 260 ProSiteProfiles Tify domain profile. 107 142 IPR010399 -
Dod03g1598 260 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 254 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1598 Dod-Chr3 21950565 21953451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1598 1 256 Tify Gene Family AT1G19180 40.809 3.11e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Dod03g1598 tify 3.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1598 K13464 - gmx:100801449 380.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1598 03 21950565 21953451 Dod03g1598 03 21950565 21953451 ECH
Dod05g2428 05 50571736 50573848 Dod03g1598 03 21950565 21953451 PCT