Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1596 ATGGCTTTAGCCATTTCCTCCACTGCATTGTCAACTCTTCCAAATAGAGAAACACTTCAAAGGATTTTTCATGAAAGAGCAACCACATGTTTGCCAAGAAGAACCCTCACAAATGCAACAAAAGGAGTGTCAAGCGTGTGTGAGCCACTTCCTCCAGACAGGCCATTGTGGTTCCCTGGTAGTTCACCTCCTGAGTGGCTTGATGGCAGTCTTCCTGGGGATTTTGGCTTTGACCCTCTTGGATTAGGTTCTGATCCAGAGTTGCTTAAATGGTTTGCTCAAGCGGAGCTAATGCATGCCAGATGGGCGATGCTTGGGGTGTCAGGAATTCTCATTCCAGAATTGCTTGAGAAGATTGGTTATGTTGAGAACTTCTCTTGGTATGATGCTGGTACCAGAGAGTACTTTGCAGACCCCACAACCTTGTTCATTGTGCAGTTGGCACTGATGGGTTGGGTGGAGGGTAGAAGATGGGCTGATATGATCAACCCAGGGAGTGTTGACATTGAGCCCAAATTACCACATAAGACTAACCCAAAAGCAGATGTTGGTTACCCTGGTGGGTTGTGGTTTGACCCCATGATGTGGGGGAGAGGGTCACCTGAGCCAGTAATGGTTTTAAGGACCAAGGAGATCAAGAATGGTAGGCTTGCAATGTTGGCCTTTGTTGGATTCTGGTTCCAAGCTATTTATACAGGGGAAGGCCCCATTGAAAACTTGATGGCACACATTGCAGATCCCGGTCACTGCAACATTTTCTCGGCATTCACACAACATTAG 780 0.4705 MALAISSTALSTLPNRETLQRIFHERATTCLPRRTLTNATKGVSSVCEPLPPDRPLWFPGSSPPEWLDGSLPGDFGFDPLGLGSDPELLKWFAQAELMHARWAMLGVSGILIPELLEKIGYVENFSWYDAGTREYFADPTTLFIVQLALMGWVEGRRWADMINPGSVDIEPKLPHKTNPKADVGYPGGLWFDPMMWGRGSPEPVMVLRTKEIKNGRLAMLAFVGFWFQAIYTGEGPIENLMAHIADPGHCNIFSAFTQH* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1596 259 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 256 IPR001344 GO:0009765|GO:0016020
Dod03g1596 259 SUPERFAMILY Chlorophyll a-b binding protein 53 257 - -
Dod03g1596 259 Pfam Chlorophyll A-B binding protein 63 229 IPR022796 -
Dod03g1596 259 Gene3D Chlorophyll a/b binding protein domain 64 249 - -
Dod03g1596 259 PANTHER PHOTOSYSTEM I CHLOROPHYLL A/B-BINDING PROTEIN 6, CHLOROPLASTIC 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1596 Dod-Chr3 21890277 21891746 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1596 52 257 Chloroplast and Mitochondria Gene Families AT3G61470 69.417 3.28e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1596 K08908 - gmx:100800374 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1596 03 21890277 21891746 Dod03g1596 03 21890277 21891746 ECH