Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1595 ATGGCCGCTGTTCGCTCTAACCACCTCCTCTTCCTCCTCATCACCACACTCTCTCTCTCCCTCCTCCCACCACAAGCTTTCTCCATGGTACCCCAATCGGAAACACAGGCCCTATTGAAGCTGAAACAATCATTTGCCAACGCGGAACGCTCATTGGCCTCATGGGTCCCGAACGTGTCCCCGTGCGGCAAGTGGGCCGGCGTCGTCTGCTTCAGAGACATCATAACGGGCCTCCACCTCTCCGATATAGGCCTAACCGGAACCATCGACGTGGACGCCCTCGTGCAGATTCGAGGCCTGAGAACCCTAAGCTTCGTCAACAACTCATTCGCCGGCCCAATCCCCGAGTTCGGCAAGCTTGGAACCATAAAATCCCTTTTGCTAACCCAGAATCAGTTCTCTGGGCCCATCCCTCCCAATTTCTTCTCCCCATTAGGCTCCCTCAAGAAAGTGTGGCTCTCCAGCAACAACTTCTCCGGCACCATACCCGAATCCCTATCGGGCCTCGACCTTCTCAAAGAGCTCCACCTCGAGAAGAACCAGTTCTCAGGCCCCATACCGAATGTGAAGCAAGACCTGACGTCATTCGACGTGTCGGACAACAACCTCGAAGGGCCCATACCGGAAAGCATGTCTTCAAAGTACGCTGCGAAATCTTTTGGCGGGAACCCGAGGCTCTGCGGGAAGCCGTTGGAGAAATCTTGTGACGGTTATGCGTCCCCGTCATTCCGGGAGAGCGGTGACGGTTCAAGTTGGCCAGTTAAAGTGATCTTCATTCTGTTGCTCGCCGTTGTCGTCGGCGTTATCTTTGTGTTTGTGAAGTCGAGGAGGAGAGGCGACGGGGATGTGGGCATGATGGGGAGAATGTACAGCGTGGAATCGGTGGTGCAAGTGCACGTGCCGAGTTCCAACCACAGGGTGGCTCCTGAACCTGAGAACCAACCTGTACTTGCCGTTGCAGGCAAGAAGGGGGGTGGTGGTGATGGGGAATCAAAGAGGGCGTTTGCGAAGAGTAGTACTGGGATGAGTGACCTGGTGATGGTGAACGACGAGAAGGGGGTGTTTGGGATGCAGGATTTGATGAAGGCTGCGGCGGAGGTTTTGGGGAATGGAGGGTTGGGTTCGGCTTATAAGGCTGCGATGGCGAGCGGGTTGTCGGTGGTGGTGAAGAGGATGAGGGAGATGAATAAGATTGGGAAGGATGTGTTTGATGCTGAGATAAGGCAGTTTGGGAGGCTCAGGCACAGTAACATTCTGGGGCCCTTGGCTTACCATTACCGCAGGGAGGAGAAGCTCTTTGTCACCGAGTACATGCCCAAAGGAAGCTTGTTGTATGCCTTGCACGGTGATATAGGAGCATCCCACTCTAACCTTAATTGGCCTACCCGATTGAAGATTGTGAAGGGGATTGCAAGAGGGTTGGGCTTCCTTTACACTGAATTCTCTACCTACGACCTGCCCCATGGAAACCTCAAGTCAAGCAATGTCCTGCTAAATGATGATTATGAGCCTCTCCTAAGTGACTTTGCCTTTCATTCACTGATCAACCCCACAGTTGCAGTGCAGGCAATGTTTGCCTATAAGTCCCCAGACTACACACAATACCAGAAACTCTCACAGAAGACTGATGTCTATTGCCTTGGAATCATCATCCTTGAAATCATCACAGGCAAGTTCCCTTCCCAGTACCACAGCAATGGAAAGGGTGGCACTGATGTTGTGCAGTGGGTCCTCACAGCAATCTCTGAGAGAAGAGAAGCTGAACTCATTGATCCACAGCTGCAAGATGAGACAGGTGATTCATTAAACCAGATGGTGCAGCTTCTCCAAGTAGGGGCTGCTTGCACAGAGAACAACCCTGAGCAAAGACTTAGCATGAAGGAAGCCATTAGAAGGATAGAGGAGTTACAGGTTTAA 1917 0.5243 MAAVRSNHLLFLLITTLSLSLLPPQAFSMVPQSETQALLKLKQSFANAERSLASWVPNVSPCGKWAGVVCFRDIITGLHLSDIGLTGTIDVDALVQIRGLRTLSFVNNSFAGPIPEFGKLGTIKSLLLTQNQFSGPIPPNFFSPLGSLKKVWLSSNNFSGTIPESLSGLDLLKELHLEKNQFSGPIPNVKQDLTSFDVSDNNLEGPIPESMSSKYAAKSFGGNPRLCGKPLEKSCDGYASPSFRESGDGSSWPVKVIFILLLAVVVGVIFVFVKSRRRGDGDVGMMGRMYSVESVVQVHVPSSNHRVAPEPENQPVLAVAGKKGGGGDGESKRAFAKSSTGMSDLVMVNDEKGVFGMQDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKIGKDVFDAEIRQFGRLRHSNILGPLAYHYRREEKLFVTEYMPKGSLLYALHGDIGASHSNLNWPTRLKIVKGIARGLGFLYTEFSTYDLPHGNLKSSNVLLNDDYEPLLSDFAFHSLINPTVAVQAMFAYKSPDYTQYQKLSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVLTAISERREAELIDPQLQDETGDSLNQMVQLLQVGAACTENNPEQRLSMKEAIRRIEELQV* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1595 638 PANTHER LRR RECEPTOR-LIKE KINASE 6 638 - -
Dod03g1595 638 Gene3D Transferase(Phosphotransferase) domain 1 438 638 - -
Dod03g1595 638 ProSiteProfiles Protein kinase domain profile. 362 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1595 638 Gene3D Phosphorylase Kinase; domain 1 330 437 - -
Dod03g1595 638 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 638 - -
Dod03g1595 638 SUPERFAMILY Protein kinase-like (PK-like) 366 633 IPR011009 -
Dod03g1595 638 CDD STKc_IRAK 368 636 - -
Dod03g1595 638 SUPERFAMILY L domain-like 31 214 - -
Dod03g1595 638 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Dod03g1595 638 Pfam Protein kinase domain 366 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1595 638 Gene3D Ribonuclease Inhibitor 191 238 IPR032675 -
Dod03g1595 638 Gene3D Ribonuclease Inhibitor 31 190 IPR032675 -
Dod03g1595 638 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1595 Dod-Chr3 21885636 21889229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1595 9 638 Receptor kinase-like Gene Family AT3G42880 48.377 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod03g1595 Pkinase 2.4e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1595 - - ahf:112738359 797.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1595 03 21885636 21889229 Dod03g1595 03 21885636 21889229 ECH
Dod05g2425 05 50546705 50548220 Dod03g1595 03 21885636 21889229 PCT