Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1590 ATGGCGTCTGCTTCCGATAGAGTCGAAGAAGCCTCCAACACGCTTCAGTCCATCTGTTACAAGCGCGGTTCCCTTCACCTTCTGGATCAGAGAAAGCTTCCTCTTGAAACAATTTACTTGGACATTCGGGACTCATCGGATGGCTGGAATGCCATACGGGATATGGTGGTCCGGGGAGCACCTGCTATTGCTATTGCAGCAGCACTCTCATTGGCTGTGGAGGTGTCCAATTTAGATGCTTTTAATGGGTCACCTGTTGATGCTGCTTCCTTCCTGCAAAAGAAATTAGAATATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTATCAGATGCTGCAACAAAACTTAAAGAGGTGATATCTAAGGCTGCTGCTTCCACTTCAGAAGCCAAGAATGTTTTCCAGGCGTATGTAGAAGCTGCTGAAATTATGCTTGGGGATGATGTTGCCTCAAACAGAGCAATTGGTTCTTATGGAGCTAAGGTTATTCAACAACAAACAGAGAAACAGAAACTTTCTGTTTTGACCCATTGCAACACTGGAAGTCTAGCCACAGCTGGATATGGTACTGCTCTGGGTGTTATCCGTGCACTTCACAGTGGAGGAGTCTTAGAAAGGGCTTATTGCACAGAAACACGCCCATTCAATCAAGGATCTAGACTTACTGCCTATGAGTTGGTGCATGACAAAATACCAGGAACTCTAATAGCAGATTCCGCTGCAGCTGCATTAATGAAAGCAGCTCAAGTGGACGCTGTTGTTGTTGGGGCAGATCGTGTTGCATCAAATGGGGACACAGCAAACAAAATTGGAACCTATAGTGTTGCCTTGAGTGCCAAGTTTCATAATGTACCTTTTTATGTGGCTGCACCCCTGACTTCCATTGATCTGTCACTTTCTTCCGGGGAAGAAATTGTCATTGAAGAAAGATCGCCAAAGGAACTGTTGAACTCACGTGGAGGACTCGGAGAGCAAGTTGCGGCATCAGGAATATCTGTGTGGAACCCGGCTTTCGATGTTACACCTGCTAATCTAATATCTGGAATCATAACTGAGAAGGGTGTCATTACAAAGACGTCCGGTGGTGATGTTTTTGACATAAAAGCATTCAAACAGAAGACAGGTTAA 1128 0.453 MASASDRVEEASNTLQSICYKRGSLHLLDQRKLPLETIYLDIRDSSDGWNAIRDMVVRGAPAIAIAAALSLAVEVSNLDAFNGSPVDAASFLQKKLEYLVSSRPTAVNLSDAATKLKEVISKAAASTSEAKNVFQAYVEAAEIMLGDDVASNRAIGSYGAKVIQQQTEKQKLSVLTHCNTGSLATAGYGTALGVIRALHSGGVLERAYCTETRPFNQGSRLTAYELVHDKIPGTLIADSAAAALMKAAQVDAVVVGADRVASNGDTANKIGTYSVALSAKFHNVPFYVAAPLTSIDLSLSSGEEIVIEERSPKELLNSRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKTSGGDVFDIKAFKQKTG* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1590 375 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 43 358 IPR011559 GO:0044249
Dod03g1590 375 SUPERFAMILY NagB/RpiA/CoA transferase-like 12 360 IPR037171 -
Dod03g1590 375 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 371 - -
Dod03g1590 375 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 15 367 IPR005251 -
Dod03g1590 375 Gene3D - 13 204 IPR027363 -
Dod03g1590 375 Gene3D - 205 368 IPR042529 -
Dod03g1590 375 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 13 371 - -
Dod03g1590 375 Pfam Initiation factor 2 subunit family 57 357 IPR000649 GO:0044237
Dod03g1590 375 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 16 358 IPR005251 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1590 54 373 Eukaryotic Initiation Factors Gene Family AT2G05830 75.701 6.40e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1590 K08963 - gmx:100799311 599.742