Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1578 ATGACCTTCATGAAAGTTATATGGAAATCCATCTTCCCCAGTTGTTACAAGGGTGGGTATCCCTCAACCAAGCCAAAGAAAGTGGTGGCAACAAAGCCAAGCTCTTCTCACAGGATTTCTGTGACGGATTTGAGTTATCCCAGCACAACATTCTCGGAGGATCTATCCATTTCTCTAGCGGGAACCAATTTGCATGTTTTCACCCTTGCTGAGCTCAAGGTTATCACGCAGCACTTCTCTTCAAGCAATTTCCTTGGAGAAGGTGGGTTCGGACCAGTGCATAAGGGGTTCATTGATGACAGAGTCAAGCCTGGTCTCAAGGCTCAGTCGGTGGCTGTTAAGCTCTTGGACTTGGATGGCACTCAGGGCCATAAAGAGTGGTTGACAGAAGTAGTTTTTCTGGGGCAACTAAGGCATCCACACCTTGTGAAGCTGATTGGATATTGCTGTGAAGAAGATCACAGACTTCTGGTATATGAATATTTACCAAGAGGAAGTTTAGAGAATCAATTGTTTAGAAGATACTCAGCATCATTACCCTGGTCAACAAGAATGAAAATTGCTGTTGGGGCTGCAAAGGGTCTAGCCTTTCTTCATGAAGCAGAAAAACAAGTCATCTATAGAGATTTCAAGGCTTCAAACATCTTGTTAGACTCAGATTACAATGCAAAACTCTCAGATCTTGGGTTGGCAAAAGACGGTCCTGAAGGAGATGACACCCACGTTTCAACCCGAATTATGGGCACACAAGGCTACGCCGCCCCAGAATATGTCATGACTGGTCACTTGACAGCAATGAGTGACGTGTACAGCTTTGGGGTAGTGCTATTGGAGCTGCTCACAGGGAGGAGGTCAGTGGACAAGACTAGGCCTCCAAGGGAGCAGAACCTTGTGGAATGGGCAAGGCCAATGCTGAACGATTCTAGGAAGCTTGGGAGGATAATGGACCCTAGACTTGAAGGGCAGTACTCTGAGATGGGGACAAAGAAAGCAGCTGCATTGGCTTATCAGTGCCTAAGCCACAGGCCAAGGAATAGGCCCACAATGAGCACTGTGGTTAAAGTCCTTGAGCCACTCCAGGACTTTGATGATATTCCAATTGGACCCTTTGTGTACACTGTTCCAAATGATCATAATGGGGTTCAGAAAGATGCAAAGGAGCATGAATCTCCTAAGGAGAGGAGGAGGGAAAGTGGTGGTGGTGGTGGTCATGATCATAGTAGGAACCACCAACACAACAATCGCCATAGGCGTCCACATCCACTTAATTCTCCCAAGTCGCCAAGGCCACAATCACAATCACAGTCATCACATTCACATTCACATATTAATCAAAGAGAAAGACACCGAAATGGTAGAAGAAGTGAGTCAAACTCTCCACCATCACATCAGAAAATGCAAGGAGGCATAGCTTAG 1416 0.4612 MTFMKVIWKSIFPSCYKGGYPSTKPKKVVATKPSSSHRISVTDLSYPSTTFSEDLSISLAGTNLHVFTLAELKVITQHFSSSNFLGEGGFGPVHKGFIDDRVKPGLKAQSVAVKLLDLDGTQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEDHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHEAEKQVIYRDFKASNILLDSDYNAKLSDLGLAKDGPEGDDTHVSTRIMGTQGYAAPEYVMTGHLTAMSDVYSFGVVLLELLTGRRSVDKTRPPREQNLVEWARPMLNDSRKLGRIMDPRLEGQYSEMGTKKAAALAYQCLSHRPRNRPTMSTVVKVLEPLQDFDDIPIGPFVYTVPNDHNGVQKDAKEHESPKERRRESGGGGGHDHSRNHQHNNRHRRPHPLNSPKSPRPQSQSQSSHSHSHINQRERHRNGRRSESNSPPSHQKMQGGIA* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1578 471 ProSiteProfiles Protein kinase domain profile. 79 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1578 471 MobiDBLite consensus disorder prediction 373 471 - -
Dod03g1578 471 Pfam Protein tyrosine and serine/threonine kinase 83 356 IPR001245 GO:0004672|GO:0006468
Dod03g1578 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Dod03g1578 471 MobiDBLite consensus disorder prediction 380 408 - -
Dod03g1578 471 Gene3D Phosphorylase Kinase; domain 1 46 161 - -
Dod03g1578 471 Gene3D Transferase(Phosphotransferase) domain 1 162 365 - -
Dod03g1578 471 PANTHER OS01G0588500 PROTEIN-RELATED 23 412 - -
Dod03g1578 471 MobiDBLite consensus disorder prediction 409 423 - -
Dod03g1578 471 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 23 412 - -
Dod03g1578 471 SUPERFAMILY Protein kinase-like (PK-like) 54 357 IPR011009 -
Dod03g1578 471 CDD STKc_IRAK 85 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1578 Dod-Chr3 21555201 21558549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1578 65 356 Glycoside Hydrolase AT3G07070 53.559 5.46e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod03g1578 PK_Tyr_Ser-Thr 9.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1578 - - gmx:100797003 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1578 03 21555201 21558549 Dod03g1578 03 21555201 21558549 ECH
Dod05g2415 05 50447002 50449678 Dod03g1578 03 21555201 21558549 PCT