Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1566 ATGATGAACGGAAGGAAAAGGTTTCCTTTTACTCAATCCCAGTGGCAAGAGCTTGAGCATCAAGCCCTTATTTACAAGTACATGGCTTCAGGTATCTCCATCCCACCTGATCTTCTATTCACTATCAAAAGGACCTATTTGGACACTCCTTTGTCTTCAAGGCTTTTGCCTCGGCAACCACAACACTTTGGATGGAACTATCTGCATATGGGTTTGGGAAGAAAAATAGACCCAGAGCCAGGTAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAGAGGCACATGCACAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAATATCAACAACGAGCACAAATGCTTCATCAATCAGTAAAAACAGTCCTGCACTAACCCCAACGGCCACTCCTCCTCCTCATCATTCTTGCTATGGTTCCAATGATCTCCAACAACAGCACTCCTCCTCCTCCTGTCTCTATCACCACCCTCCATCAAGAAGTGTTGCTTTTTCATTTGAAGACAACAACAGTGCTGCTCCCTTGTTTCTTGACACTGGCTCTTTCTCCCAGACCAACAACACAGACTGCAGGTATGTTTATGGAGTGAAAGAGGATATGGATGAGCATCCTTTCTTCACAGAACCTTCCGGTACTATGAAAAGCTTCTCTGCTTCCTCTATGGATGATTCTTGGCAACTCACACCACTCACTATGAGCTCATCATCATCATCATCTTCCTCTTCTTCAAAGCAGAGGAGTTGCTCCAGTTTCTCCAGTGATTACTCTTACTTGCAACTTCAGAGCCTCAGTGGCCACTCAAAGCATCAAGAGCAAGATCAGGGTTGCTACTTGTTGGGTGGTGGTGACCATATCAAATGTGAAACGCTCATGAAGCTAGGGAAAGAAGAACCTCATCAGAAGACTGTTCATCGCTTCTTTGATGAATGGCCCCATAAAGCTAGTAGAGCTGGCTCACCATGGCTTGATTTGGATGACAAATCATCCACAACTCAACTATCAATTTCCATTCCCACCTCTGTTCATGATTTTCCAACCTTCAATTCAAGAACCCCACCTTGGTAA 1116 0.4462 MMNGRKRFPFTQSQWQELEHQALIYKYMASGISIPPDLLFTIKRTYLDTPLSSRLLPRQPQHFGWNYLHMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTISTTSTNASSISKNSPALTPTATPPPHHSCYGSNDLQQQHSSSSCLYHHPPSRSVAFSFEDNNSAAPLFLDTGSFSQTNNTDCRYVYGVKEDMDEHPFFTEPSGTMKSFSASSMDDSWQLTPLTMSSSSSSSSSSSKQRSCSSFSSDYSYLQLQSLSGHSKHQEQDQGCYLLGGGDHIKCETLMKLGKEEPHQKTVHRFFDEWPHKASRAGSPWLDLDDKSSTTQLSISIPTSVHDFPTFNSRTPPW* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1566 371 Pfam QLQ 9 42 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod03g1566 371 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod03g1566 371 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Dod03g1566 371 Pfam WRC 78 120 IPR014977 -
Dod03g1566 371 PANTHER GROWTH-REGULATING FACTOR 6 2 358 - -
Dod03g1566 371 MobiDBLite consensus disorder prediction 127 160 - -
Dod03g1566 371 MobiDBLite consensus disorder prediction 127 142 - -
Dod03g1566 371 SMART QLQ_2 8 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Dod03g1566 371 PANTHER - 2 358 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1566 Dod-Chr3 21363794 21365482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1566 7 120 GRF Transcription Factor Family AT3G13960 70.175 1.06e-52 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Dod03g1566 WRC 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1566 - - gmx:100781613 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2402 05 50280615 50282852 Dod03g1566 03 21363794 21365482 PCT