Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1565 ATGAAACTCGCTGTGGCCGTTGGGTTTGAGGAGCAGTGCTGCCACTTGTACAGCAGTTGTCGAAAGGAGTTCATTCGACAGTGTCTTTTGGCATTAAAGCTGCAAGACTTCATCAATGAGGAAGATCACAATGTTTGCAATGCAACAGAGATGATCCGGGGTTGGATCAAAGCTTCTAAGCTTGCTATCCTTATTCTGTTTCCAATGGAACGGAGACTTTGTGAACGCATTTTCTCCGGACTATCCTCCTCCGGGGATCTCTCTTTCATGCAAATTTGCAGGGAACCCACCATTCGTCTGGTAAACTTTGCCAAAACTTTGTCAGTTGAAATCAGTTCGCCCAAGACTCTTGTAGAGGCGGGGCAAGTGTTTATGACATTGCGTGGCATCATTCCTGAGTTGGAATCGCTATCTTCCGCCCAAGATGATGTGTCGCTTAGCAATGAAGCAATCGCGATTCACAAGAGATTGGGTGAAGCAATCTGGGACGTTTTCAATGACTTGGAGAACCTGATTCACTCTGACACGGCAGTTGCAGATGTTCCAGGAGGCATTTGTCCAATTACTTATGATGTCATGAATTGTCTGGATGGAATTCTGGAAGTCTTGCCTGTATTGCAGAAAGTTCTGGAAGAGTATCCTATGGTGGCTAATAGAGGCGGACCGAGGCACATGGCTACTGACCTTGTTATTATCAATCAAAGGCGTGTGCTGGTAATGAAGCATATTGTGGTGATAGAATTCGTAATAGTCAACTAA 759 0.4519 MKLAVAVGFEEQCCHLYSSCRKEFIRQCLLALKLQDFINEEDHNVCNATEMIRGWIKASKLAILILFPMERRLCERIFSGLSSSGDLSFMQICREPTIRLVNFAKTLSVEISSPKTLVEAGQVFMTLRGIIPELESLSSAQDDVSLSNEAIAIHKRLGEAIWDVFNDLENLIHSDTAVADVPGGICPITYDVMNCLDGILEVLPVLQKVLEEYPMVANRGGPRHMATDLVIINQRRVLVMKHIVVIEFVIVN* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1565 252 Pfam Exo70 exocyst complex subunit 55 213 IPR046364 GO:0000145|GO:0005546|GO:0006887
Dod03g1565 252 Gene3D Exocyst complex component Exo70 1 238 - -
Dod03g1565 252 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 2 202 - -
Dod03g1565 252 PANTHER EXOCYST COMPLEX PROTEIN EXO70 2 202 IPR004140 GO:0000145|GO:0006887
Dod03g1565 252 SUPERFAMILY Cullin repeat-like 6 214 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1565 Dod-Chr3 21358875 21363056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1565 2 219 EXO70 exocyst subunit family AT5G58430 45.701 2.58e-54 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1565 K07195 - thj:104799384 179.874