Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1549 ATGCTCACATGCATAGCTCGTCCCAAGAAACTCGGCGACGACTCACTGAGTCACCCGGACGATCCCGATTCCAGCACCAACAGAAACCAATCCGTCAAGTCCCTCACATCTCAGTTAAAGGACATGGCATTGAAGGCGTCGGGGGCGTACAAGCACTGCAGCCCGTGCGCGGCGCCGAGTCGACTCAGGAACGCTGGCAGCGGCGGCGGCGGCGGCGGCGAATCGGACGGCGACTCGGATCGGTTCCGGTGGTCGTATCGGCGGACGGGGAGCTCGAGCTCGTCTGCGGGGACTAGGACAGGGTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCGAGCGGGGAGGGGACGCCGAGCTCCACCGGAGGGAGTGGGCGGAGGACGGTCGATCCGGTGGTGGTGCTGGTGGAGGAGAATGAGCCCAAGGAGTGGGTGGCGCAGGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCACGTGGCGGGAACGACCTCAAGCGGATACGGTTCAGCCGTGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCATTCCCTCTTCCAACTCCACCAAGGTCTGAAGATGAGAGTTCAAAGCGCGAATCAGTAGAAGACAGTCCTGTCACACCTCCACTAACCAGGGAACGGCTACCTCGTAATTTACACCGCCCAACAGGGATGGGAATGGGGTACTCATCCTCGGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTACAATGACTCGAATGGAATGAACTCAACCCCAAAGGTGTCAACCATTAGTGCTGCCAAGACCGAGATATCATCAATGGATGCTTCTATAAGAAGTAGTTCATCTAGAGAAGCTGATCGCTCAGGCGATCTATCAATGAGCAATGCTAGTGACTTGGAGGCTGAATGGGTTGAGCAGGATGAACCTGGGGTTTACATTACCATCAGAGCACTGCCAGGTGGCAAACGGGAGCTCAAACGAGTCAGGTTCAGCCGCGAAAAATTTGGGGAGATGCATGCTAGACTATGGTGGGAAGAGAACCGTGCCAGAATACACGAACAATACTTGTGA 1137 0.5523 MLTCIARPKKLGDDSLSHPDDPDSSTNRNQSVKSLTSQLKDMALKASGAYKHCSPCAAPSRLRNAGSGGGGGGESDGDSDRFRWSYRRTGSSSSSAGTRTGWGKEMEARLKGISSGEGTPSSTGGSGRRTVDPVVVLVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESVEDSPVTPPLTRERLPRNLHRPTGMGMGYSSSDSFDHQSMQSRHYNDSNGMNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSMSNASDLEAEWVEQDEPGVYITIRALPGGKRELKRVRFSREKFGEMHARLWWEENRARIHEQYL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1549 378 MobiDBLite consensus disorder prediction 1 40 - -
Dod03g1549 378 MobiDBLite consensus disorder prediction 207 281 - -
Dod03g1549 378 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 378 IPR044532 -
Dod03g1549 378 Pfam Transcription factor BRX N-terminal domain 30 56 IPR027988 -
Dod03g1549 378 MobiDBLite consensus disorder prediction 22 40 - -
Dod03g1549 378 Pfam Transcription factor regulating root and shoot growth via Pin3 322 377 IPR013591 -
Dod03g1549 378 Pfam Transcription factor regulating root and shoot growth via Pin3 144 198 IPR013591 -
Dod03g1549 378 MobiDBLite consensus disorder prediction 55 103 - -
Dod03g1549 378 MobiDBLite consensus disorder prediction 250 281 - -
Dod03g1549 378 MobiDBLite consensus disorder prediction 293 315 - -
Dod03g1549 378 ProSiteProfiles BRX domain profile. 323 378 IPR013591 -
Dod03g1549 378 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 378 - -
Dod03g1549 378 ProSiteProfiles BRX domain profile. 144 199 IPR013591 -
Dod03g1549 378 MobiDBLite consensus disorder prediction 86 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1549 Dod-Chr3 21119367 21128272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1549 1 378 Major Intrinsic Protein MIP AT1G31880 44.357 1.89e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1549 - - gmx:100794109 551.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2385 05 50145733 50149381 Dod03g1549 03 21119367 21128272 PCT