Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1535 ATGCTCCCATTCAACTTTGTCCATTTGCCCCTTATGAAATATGATGCATTCTCCACAATTCAGGAAATCCGAATGAACATTGAGGAGCCTATGCGCAGGCTGATAGCACAGGAGCTAAAAATTAATCAGTCATCACAGTGTCCTTATGTTGTTGTCTGCTACCAATCATTCTACAATAATGGGGTCATATCAATCATCTTAGAGTACATGGATGGAGGATCCTTAGAAGATCTTCTGAACAAAGTCAAAACAATTCCAGAGCCATATCTTGCTGCCATCTGTAAGCAGGTACTGAAGGGCTTAATATATCTTCACCATGAAAAACATATCATCCACAGGGACTTAAAACCTTCTAATTTGCTGGTAAATCATAGAGGGGAAGTGAAGATAACTGACTTTGGTGTGAGTGCAATCATGGAAACTACATCTGGTCAAGCAAATACTTTTATTGGCACATACAACTATATGTCTCCAGAGAGAATCACTGGAAGCGTGGGTGGCTACAACTACAGAAGTGATATATGGAGCTTGGGACTGATACTGCTCAAGTGTGCTACGGGGCAGTTTCCATATACACCACCAGAGGAAAAATTAGGATGGGAAAATATTTACCAGCTTATTGAAGCCATAGTCGAGAAACCTTCACCTAGTGCTCCATCTGATCAATTTTCTCCAGAATTTTGTTCATTTATCTCAGCATGTTTACAAAAAAATCCAAGGAACAGACCGTCGGCACAGGACCTTGTGAGACATCGCTTTATCAGCATGTATGAGGACTTGGATGCAGACCTTTCAGCATACTTCTCTAATGCAGGATCTACACTTGCAACCATATAA 837 0.4074 MLPFNFVHLPLMKYDAFSTIQEIRMNIEEPMRRLIAQELKINQSSQCPYVVVCYQSFYNNGVISIILEYMDGGSLEDLLNKVKTIPEPYLAAICKQVLKGLIYLHHEKHIIHRDLKPSNLLVNHRGEVKITDFGVSAIMETTSGQANTFIGTYNYMSPERITGSVGGYNYRSDIWSLGLILLKCATGQFPYTPPEEKLGWENIYQLIEAIVEKPSPSAPSDQFSPEFCSFISACLQKNPRNRPSAQDLVRHRFISMYEDLDADLSAYFSNAGSTLATI* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1535 278 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 15 278 - -
Dod03g1535 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Dod03g1535 278 Gene3D Transferase(Phosphotransferase) domain 1 72 275 - -
Dod03g1535 278 SMART serkin_6 6 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1535 278 PANTHER MAP KINASE KINASE 15 278 - -
Dod03g1535 278 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1535 278 CDD PKc_MAPKK_plant_like 20 258 - -
Dod03g1535 278 Pfam Protein kinase domain 31 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1535 278 SUPERFAMILY Protein kinase-like (PK-like) 22 258 IPR011009 -
Dod03g1535 278 Gene3D Phosphorylase Kinase; domain 1 13 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1535 Dod-Chr3 20902558 20908376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1535 17 275 MAP Kinase Kinase Gene Family AT4G26070 66.023 7.20e-133 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dod03g1535 Pkinase 9.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1535 K20603 - gmx:100789241 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2374 05 50044846 50050220 Dod03g1535 03 20902558 20908376 PCT