Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1534 ATGGAGGAAATTACTTCGACGGTTGCAGTGCCATTTAGACTTGGGAATTTGATCCAAAAGGAGTCGACTGTGACAACCCACATGGAGATAACTGGTCTGAAGCTTATGGCAAATACAGCAGCAGCAGCGGCTTTGATATTAAATCCGTCAATTGAGGGTTGTCAATCTTACTCCGTTGGAAGCGAAAGCCGCACAGATATAAGTCCAAAACACCAAATTAAAGTCTCTCCAGAGGTAAAGGAGAATCAGGTCGGAGCTGACCTAGCATCAGAAATGGTTACTGAATGTGACAGTAATTGGGTCTTGACTGAAAGCCATAACCAGGCAATAGTGGAAGGTGAATTCATGTTAGCTAACAATTTTCATTGTGCACATAATCCAAAATCTCAGTCTGCAGCTAGTGACAAAAACTGTCTTCGGAAGGAATCTTCTACTTTGATGACTAATTGTTCTGATACAGATTTACCAATTACCACCAAGGTTGATGACCATATCCACGGTAAGTCCAGTTTGATCGAGCTGCAGGCGGAGCTAGAGCCTGTGCAGAACATGGTTTCTGCTGCAATGGAACTTCAGATTGAAGATGGAAGTGGATCAGATGGGTCTGATCTGAAAGCATCTGCTGCACTTAATAAAATGCCAGAGGTGATGCAAACAAGAAGAACAAGCTGCCAGAATGCCTTGGAATTGAGTGGTGGTGGTCCTCTCTGGGGTTTCTCATCAGTTTGTGGAAGGAGACAGGAGATGGAAGATTCTATTGCTGTTAAGCCTCAACTCTTTCAAGTTCCTTCACATATGCTAATTGATGACCATGTGAATGAAAACAAAAACTCATCAGCCCATTTTTTTAGTGTCTATGATGGACATGGGGGTTGTCAGGTTGCCAATTATTGCCGGGATCATCTTCACTCAGTGCTGATTGAGGAGATAGGAGCTGCAGAATCTAATATATCTAACGACAATGGGAGAGACAATTGGCAGGATTGTTGGAAGAAAGGATTCTCTAATTGTTTTCATAAAGTAGATGATGAGGTTGGAGGGGTCAGTGCACCTAGAATGGGAAGCAACATTGATGATGGTTCTGAGTCTAGTAGTGAACCCCTTTCTCCTGACACTGCTGGCTCGACTGCAGTGGTTGCTCTTTTAAGTCAAACCCACATAATAGTTGCAAATTGTGGTGATTCAAGAGCAGTTTTGTGTCGCGGAAAAGAAGCCGTGCCATTGTCTACTGACCACAAACCAAACAGAGAGGATGAGTGGGAAAGGATAGAAGCTGCGGGAGGAAGGGTCATACAGTGGAATGGATACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATTGGTGATAGGTACTTGAAACCATGGATAATTCCAGACCCAGAAGTCATGTTTGTTCAAAGAGAGAAAAACGATGAATGCCTTATTCTTGCCAGTGATGGTTTATGGGATGTCATGACAAATGAAGAAGTCTGTGACATTGCAAGAAAACGAATCCTTCTTTGGCATAAGAAGAATGGCGGCGGCGGCGGCAGCAGCAGCGGCAGCAACAATGTACCAACAGGAGGACAAGGCCATGGAGTTGATCCTGCAGCTCAATCTGCTGCAGAGTATCTGTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATCTCTGTCATTGTTGTAGACTTGAAGGCCCAAAGAAAATTCAAGAGAAAAGCATAA 1710 0.4398 MEEITSTVAVPFRLGNLIQKESTVTTHMEITGLKLMANTAAAAALILNPSIEGCQSYSVGSESRTDISPKHQIKVSPEVKENQVGADLASEMVTECDSNWVLTESHNQAIVEGEFMLANNFHCAHNPKSQSAASDKNCLRKESSTLMTNCSDTDLPITTKVDDHIHGKSSLIELQAELEPVQNMVSAAMELQIEDGSGSDGSDLKASAALNKMPEVMQTRRTSCQNALELSGGGPLWGFSSVCGRRQEMEDSIAVKPQLFQVPSHMLIDDHVNENKNSSAHFFSVYDGHGGCQVANYCRDHLHSVLIEEIGAAESNISNDNGRDNWQDCWKKGFSNCFHKVDDEVGGVSAPRMGSNIDDGSESSSEPLSPDTAGSTAVVALLSQTHIIVANCGDSRAVLCRGKEAVPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPDPEVMFVQREKNDECLILASDGLWDVMTNEEVCDIARKRILLWHKKNGGGGGSSSGSNNVPTGGQGHGVDPAAQSAAEYLSRLALQRGSKDNISVIVVDLKAQRKFKRKA* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1534 569 MobiDBLite consensus disorder prediction 508 530 - -
Dod03g1534 569 ProSitePatterns PPM-type phosphatase domain signature. 282 290 IPR000222 GO:0043169
Dod03g1534 569 CDD PP2Cc 238 559 IPR001932 -
Dod03g1534 569 SUPERFAMILY PP2C-like 236 560 IPR036457 -
Dod03g1534 569 MobiDBLite consensus disorder prediction 349 372 - -
Dod03g1534 569 Pfam Protein phosphatase 2C 238 552 IPR001932 -
Dod03g1534 569 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 129 568 - -
Dod03g1534 569 SMART PP2C_4 226 557 IPR001932 -
Dod03g1534 569 MobiDBLite consensus disorder prediction 509 523 - -
Dod03g1534 569 PANTHER ALPHABET, ISOFORM E-RELATED 129 568 - -
Dod03g1534 569 ProSiteProfiles PPM-type phosphatase domain profile. 236 559 IPR001932 -
Dod03g1534 569 Gene3D - 228 569 IPR036457 -
Dod03g1534 569 MobiDBLite consensus disorder prediction 356 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1534 Dod-Chr3 20898783 20902366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1534 166 568 PP2C-type Phosphatase Gene Family AT4G26080 52.941 2.82e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1534 K14497 - gmx:100802159 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2373 05 50043472 50047373 Dod03g1534 03 20898783 20902366 PCT