Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1531 ATGGAGAATCGTAAGGAGGAGGAGGAGGAAGGGAAGGTGCAAGAGGGGGAGGAGAATGACGGGGTGGGGCCCATGGCTGGAGAGGAGGAAGAGGAAGAGGATGGCGGAACGGTGGGGTCCAGCTTGACGATGGAGAGGGTGGCTGCAGCCAAGAAATTCATTGAGAACCATTACAGGGCTCAGATGAAGCACATCCAAGAACGCAAGGAGAGGCGTTCAGTCCTACAAAAGGAGTTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTGCTGAAGGATTTGGAGCGCAAGGAGACTGAGTATATGCGGTTAAAAAGACATAAAATATGTGTTGATGATTTTGACCTTCTAACCATTATTGGCAGGGGAGCCTTTGGGGAGGTAACACTGTGTCGGGAGAAGAAATCAGGTAACATATATGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTCAGCAGGGGACAGGTTGAGCATGTTAGAGCTGAAAGGAATGTACTTGCAGAAGTTGCCAGTGACTGCATTGTGAAGCTTTATTACTCTTTTCAGGATGCTGAGTACTTATATCTGATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTGATAAGGGAAGAAACTTTGACTGAAACAGTGGCTAGATTTTACATTGCCCAAAGCGTTTTGGCCATAGAGTCTATTCATAAACACAACTATATTCATCGAGATATAAAACCTGACAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGCCTTTGCAAGCCACTTGACTGCTCAAATTTATCATCTATAAATGAAAAGGAAGTCTTGGATGATGAGAACTTGAATGATACCATGGATGTCGATGGAGCCTTCCCAAATAGCAGAAATGGAAGACGCTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAGTGAACCGCAGGAAATTGATTGTGCATTGGAGAAATCACTTAAAATTTCCGGATGAGGCAAGGTTGTCTCCTGAAGCGAAGGATCTAATATGTCGGTTACTTTGTGATGTTCAATATCGGCTTGGTACCAGGGGAGCAGAAGAAATTAAGGCTCATCCTTGGTTCAAAGATGTCAACTGGGACAAGCTCTATGAAATGGAGGCAGCATTTAAACCACAAGTCAATGGCGAGCTTGACACTCAAAATTTTATGAAATTTGATGAGGTTGAACAACCAAACCCATCTAGACCTGGGTCAGGACCCAGCAGAAAGATGCTGTTGACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTCGCTGCTGTTAAGGGGACACGTCATTCCATTGTAACAGATAAGGGGAATTTGCCAGCACCACAGCGGCAATCATCAGTTGACTCCTCACACAGTAATAGACCAAACTTTGATCTTTATGCTTTAATGTTTGTAATCTGTTCTAACAAACCCATTTTGTTCTAG 1467 0.4308 MENRKEEEEEGKVQEGEENDGVGPMAGEEEEEEDGGTVGSSLTMERVAAAKKFIENHYRAQMKHIQERKERRSVLQKELASSHVPEEEQINLLKDLERKETEYMRLKRHKICVDDFDLLTIIGRGAFGEVTLCREKKSGNIYAMKKLKKSEMLSRGQVEHVRAERNVLAEVASDCIVKLYYSFQDAEYLYLIMEYLPGGDIMTLLIREETLTETVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINEKEVLDDENLNDTMDVDGAFPNSRNGRRWKSPLEQLQHWQVNRRKLIVHWRNHLKFPDEARLSPEAKDLICRLLCDVQYRLGTRGAEEIKAHPWFKDVNWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEQPNPSRPGSGPSRKMLLTPQDLSFVGYTYKNFAAVKGTRHSIVTDKGNLPAPQRQSSVDSSHSNRPNFDLYALMFVICSNKPILF* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1531 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 290 - -
Dod03g1531 488 PANTHER SERINE/THREONINE-PROTEIN KINASE 319 477 - -
Dod03g1531 488 ProSiteProfiles Protein kinase domain profile. 116 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1531 488 Pfam Protein kinase domain 118 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1531 488 MobiDBLite consensus disorder prediction 451 466 - -
Dod03g1531 488 SMART serkin_6 116 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1531 488 Gene3D Phosphorylase Kinase; domain 1 74 199 - -
Dod03g1531 488 SMART pkinase_C_6 369 434 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod03g1531 488 MobiDBLite consensus disorder prediction 1 41 - -
Dod03g1531 488 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Dod03g1531 488 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 35 290 - -
Dod03g1531 488 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 319 477 - -
Dod03g1531 488 SUPERFAMILY Protein kinase-like (PK-like) 113 439 IPR011009 -
Dod03g1531 488 ProSiteProfiles AGC-kinase C-terminal domain profile. 369 442 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dod03g1531 488 ProSitePatterns Protein kinases ATP-binding region signature. 122 145 IPR017441 GO:0005524
Dod03g1531 488 MobiDBLite consensus disorder prediction 22 36 - -
Dod03g1531 488 MobiDBLite consensus disorder prediction 446 466 - -
Dod03g1531 488 Gene3D Transferase(Phosphotransferase) domain 1 318 388 - -
Dod03g1531 488 Gene3D Transferase(Phosphotransferase) domain 1 200 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1531 Dod-Chr3 20863994 20873704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1531 320 446 AGC Kinase Gene Family AT4G33080 75.781 1.26e-62 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Dod03g1531 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1531 K08790 - csin:114265385 632.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1531 03 20863994 20873704 Dod03g1531 03 20863994 20873704 ECH