Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g1522 | ATGGAACCTCGCGTTGCGAATAAGTTTCGGCTTGGCCGGAAGATCGGTGCTGGTTCCTTTGGGGAGATTTATTTAGGCACTAATGTTCAAACTAATGAAGAGGTTGCAATTAAGCTTGAAAGTGTCAAGACAAAGCATCCTCAGTTGCTGTATGAGTCCAAGTTGTACAGAATTCTCCAGGGAGGAACTGGTATTCCAAATGTTAGATGGTTTGGAGTGGAGGGAGATTATAATGTTCTAGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTTAACTTCTGTAGTAGAAAGCTCTCGCTAAAGACAGTGCTCATGCTAGCTGATCAAATGGTCAACCGTGTTGAGTTTGTCCATTCTAAATCATTTCTACATCGGGATATCAAACCAGATAATTTCCTTATGGGCTTGGGAAGGCGGGCTAACCAGGTTTACTGTATTGATTTTGGATTGGCAAAGAAATACAGAGACAGTACAACACACCAACACATTCCCTACAGGGAAAATAAGAATTTGACTGGAACTGCGAGATATGCTAGCATGAATACTCACCTTGGAATTGAGCAAAGTCGAAGAGATGATTTAGAGTCTCTTGGTTTTGTCTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAAGGACTTAGAGCAGGAACCAAGAAACAAAAGTATGAGAAAATAAGTGAAAAAAAAGTAACTACCTCTATAGAGGCCTTGTGTCGAGGTTATCCAACTGAATTTGTATCATACTTCCATTACTGCCGCTCATTAAGGTTTGATGATAGGCCAGATTATGCTTACCTCAAAAGAATATTTCGCGACTTGTTTATTCGTGAAGGATTCCAGTTTGATTATGTGTTTGACTGGACCATCTTGAAGTATCAGCAATCACAGTTAGCCACTCCACCAGCACGTGCCATTGTTCCTGGTGCCGGAACTAGTTATGGAATGCCTCCACCTGTGACTAGTGCTGCCGATAGACAGACAGGAGGGGAAGAAGGAAGACCTCCCCCTGGTCTGATTTCAGTGGATTCCTCAAGGCGAAGAATGTCAGGTCCCATTTTAAATTCTGTAAGTTCTTCAAGGCAGAAAAACCTGGTCACCACTGATCCTGCTGTTAATAAGGATGCTATGTTGTCCAGTGCCAATATCCTCGGTACGTCAACTGGATCATCAAGGCGAGTTGCTGTTTCAGGTAGTCATGAGGCTTTTGTTGGTGCTGAGTCAGATCAGCGTTTGCGTACTGCTGAGGCTAGCCCTTCAGCAGTACACAGGGTTTCAGGTGGACAAAGAAGTTCACACCTTGGATCTTCGGATCCCAGGAGGGTAGTATCATCATCGAGAGGCGCTTCGCATGTCAAGAATTATGAAACTGCAGTCAAAGGCATTGAGGCTTTGCAGATTGAGGATGATGAAAGGGCCCGACGTTAA | 1434 | 0.4379 | MEPRVANKFRLGRKIGAGSFGEIYLGTNVQTNEEVAIKLESVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMVNRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGFVLMYFLRGSLPWQGLRAGTKKQKYEKISEKKVTTSIEALCRGYPTEFVSYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARAIVPGAGTSYGMPPPVTSAADRQTGGEEGRPPPGLISVDSSRRRMSGPILNSVSSSRQKNLVTTDPAVNKDAMLSSANILGTSTGSSRRVAVSGSHEAFVGAESDQRLRTAEASPSAVHRVSGGQRSSHLGSSDPRRVVSSSRGASHVKNYETAVKGIEALQIEDDERARR* | 478 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g1522 | 477 | MobiDBLite | consensus disorder prediction | 313 | 373 | - | - | |
Dod03g1522 | 477 | ProSitePatterns | Protein kinases ATP-binding region signature. | 15 | 38 | IPR017441 | GO:0005524 | |
Dod03g1522 | 477 | MobiDBLite | consensus disorder prediction | 350 | 373 | - | - | |
Dod03g1522 | 477 | SMART | serkin_6 | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1522 | 477 | PANTHER | CASEIN KINASE I-LIKE | 1 | 459 | - | - | |
Dod03g1522 | 477 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 124 | 136 | IPR008271 | GO:0004672|GO:0006468 | |
Dod03g1522 | 477 | MobiDBLite | consensus disorder prediction | 426 | 454 | - | - | |
Dod03g1522 | 477 | PANTHER | CASEIN KINASE-RELATED | 1 | 459 | - | - | |
Dod03g1522 | 477 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 290 | IPR011009 | - | |
Dod03g1522 | 477 | MobiDBLite | consensus disorder prediction | 419 | 477 | - | - | |
Dod03g1522 | 477 | ProSiteProfiles | Protein kinase domain profile. | 9 | 278 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1522 | 477 | CDD | STKc_CK1_delta_epsilon | 8 | 282 | - | - | |
Dod03g1522 | 477 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 307 | - | - | |
Dod03g1522 | 477 | Pfam | Protein kinase domain | 10 | 227 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g1522 | Dod-Chr3 | 20747458 | 20757284 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g1522 | 7 | 223 | EF-hand Containing Proteins | AT2G17890 | 26.222 | 6.89e-13 | 68.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1 | Dod03g1522 | Pkinase | 8e-26 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g1522 | K02218 | - | gmx:100785851 | 793.497 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod05g2362 | 05 | 49945548 | 49950507 | Dod03g1522 | 03 | 20747458 | 20757284 | PCT |