Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1515 ATGGTGGTGCCATTGAACGAAGCGGAAAACACGAATTCCACCGAAGAAATAGTAGTAGTCACAGAAAAACCGGTCGAGGAACTCAAAGACGCTGTTTCTCTGAACGACGACGTGTCGACCGGGAGTTCTGAGAGGAAGGAGTCGGCAGTGACGGAAGAGGTTGGCGACGGGGGCGTTGAGTGGTGGCCGGCGGGATGGGGGTGCACGGCGGCGTTCGTGAAGAAGACTTTTGAGATGGTGGAGGATCCGGATACGGACCCGATTGTGTCGTGGAGCTTCGCACGTGACAGCTTCGTCGTTTGGGAGCCTCACGTGTTCTCCAATACCATTCTGCCCAAGTACTTCAAGCACAGCAATTTCTCTAGTTTCATTCGCCAGCTTAACACTTATGGCTTTAGGAAGGTTTATTCAGACCGTTGGGAGTTTGCAAATGAAGGATTTCAGGGTGGGAAGAAGCATCTGCTGAAGAACATCAGGAGGAGGAGGAGGAGCAAGTACAACAAACAACATCAAGCAGAATCGAACTCGACGAAGCCCTGTCTGGAGGACGAAATTGAGAAGCTGAAGAATGACATGAGCTTATTAAAACTGGAAACTCTGAAGCTGAGACATCTTCATGAAAATACACAGATTCAACTCACCAGTGTTGAGGAGCGAGTCCGGAGTGCAGAGTTGAGGCAGTGTCGGATGCTAGTTTTCCTCACCAGAATTGCCAAGAAGCCCTCTTTTGTTGAGCAGTTAATGCAGACGGTGAAGCGAAAAAGGGAGCTTGATGGGGTAGACATGGCTAGAGACGCAGATTGA 804 0.5 MVVPLNEAENTNSTEEIVVVTEKPVEELKDAVSLNDDVSTGSSERKESAVTEEVGDGGVEWWPAGWGCTAAFVKKTFEMVEDPDTDPIVSWSFARDSFVVWEPHVFSNTILPKYFKHSNFSSFIRQLNTYGFRKVYSDRWEFANEGFQGGKKHLLKNIRRRRRSKYNKQHQAESNSTKPCLEDEIEKLKNDMSLLKLETLKLRHLHENTQIQLTSVEERVRSAELRQCRMLVFLTRIAKKPSFVEQLMQTVKRKRELDGVDMARDAD* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1515 267 Gene3D - 68 162 IPR036388 -
Dod03g1515 267 Coils Coil 206 226 - -
Dod03g1515 267 Pfam HSF-type DNA-binding 72 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 Coils Coil 178 198 - -
Dod03g1515 267 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 43 260 IPR027725 -
Dod03g1515 267 SMART hsfneu3 68 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 PRINTS Heat shock factor (HSF) domain signature 110 122 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 PRINTS Heat shock factor (HSF) domain signature 72 95 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 PRINTS Heat shock factor (HSF) domain signature 123 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 ProSitePatterns HSF-type DNA-binding domain signature. 111 135 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dod03g1515 267 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 43 260 - -
Dod03g1515 267 SUPERFAMILY "Winged helix" DNA-binding domain 70 161 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1515 Dod-Chr3 20659971 20661691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1515 72 264 HSF AT2G26150 50.500 1.44e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dod03g1515 HSF_DNA-bind 1.9e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1515 K09419 - gmx:100818430 286.96