Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod03g1496 | ATGGGGATGGGGGTGGTTTTGGCACTGATTCTGCAGTTGGTGAATCTCTGCATCATTGGCTATGCAGTGACAGTCCAAGGATCCAAAGGGTCTGTTATATCCCCATCTCCAGCATTCCCTCCTGTCGTTCATCCTAGAGGAGAAACACCTGGTCCTATCATCCATCATGGACAGACATGGGGAAGCAATGGACCTAACTCACCATCAGATCCAGATGGGTTTGTTATATCCCCATCTCCAGCAACCTTACCTGTGGATGCTTCCCCCAGTGAAGGACCTGCTCTTTTACCCCCAAGAGATCCACAGAGAACCATTGCCCCAAGCTCTCCAGAAGCACCAAATGGGTCATTCTTGCCTTCTCCAGTTACACAACCACCTCCTGCATCAGCTCCAACTCCTCAGAAGATAAAAGGAATTGAACCATCCATATCTCCTAGTCCTAGTCCAAGCAACATTACATTATCTCCCCCATATCGTGCTGCTCCTGTACCGTCAACCGCCCAACGGAGTGTGTCACCATCATCCATGCAACCAAGTCCACCTCAAAGGGAAGCACCTGCTGTTAGGCCCCCTGTGTCCACACCAACTGCTCCAGCACCAGCTGCAATACCTTCTGAAAAATCGCCAAAGAATTCGCCAGTCAGCCAGCCAATTGAACATGGAGGTTTGCCTCCTATGGTTGATAAGAGGAATGCAAGTAAGAGTCACACGCCAGAGCCAGTTTCACCAGCCCCGGTTGCAATACCTTCCACCAAATTGCCCAAAATTTCACCAGCAACTAAACCAGTTGGAAATGGAAGTTTTCCTCCTGATGTTCACAGCAAAGGTGCAAATAAAAGCCACACCACAGAGCCAATTGCACCAGTTCCTGTTGCAGTCAGTTTGCCCAAACTATCGCCAGTGAGTCTGCCAACTGAACATGGAAGTTTGCCTCCAACTAATTCCAATACGGGTCACATACAGGAGCCAGTTTCACAAGCCCCAGTTGCATTACCTCCTGCAATTCTGCCAGAAAATTCACCATTCAGCCAACCAATTCATCGGGGAAGTTTTCCTCCTAATGTTCATAACAGAACTGTAAATAAGGGTCACACTCACACCCCAGAGCCAATACCGCCACCACCAGTTACATCACCAGCAAGGATATTTCCAATAAATCCACCATCAGTCCAGCCAGTTACACCAGCAGTATCTCCATCAAAATTACCAGTGCCTGTTGTCTCTCCCGCATTAACTCCTCCTAGAAGCATCCATTGGAAAGAAGGCGGAGAACCAGTTTCAGCACCTTTGTACAAAATACCTAAGCCACTACCAGCTGTAGTACATTCCCCTGCTCAAGCCCCTGCTGCACACAATTCAAGGCAATTTCATTATCCTCCTGAGCCACTGATTTCTTCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCATATTCACCTTCAACCACATTTTATAAGCATTATCATTCAAGGAACATAGTCACCAGCCCTGCTCCTGAATCATCATATTTCGTCTCTCCGCCCAGTCCAGAACACCAAGATCACCCAATTCCTCCCTCATTACTGCCCACAAGTGGACGACATGCTCCACCACCAATGAACACAGGTTCATCAGTTTCCCCGTTTGCATTCCCTATTGTGTCACCGGCAAGCCAGGCTTCACCTGCCCCTTCTCCATCATTCAAAATATCCCCTCACCCAACCAAAGCTGTATTGCATCCTCCGCAAATATCTCCTTCACAGCCTCCTTCCAAGAGTCCGAAGAAGCCCGTCCGGCCTCACGTTCAAGCCCTGCCTCCCCCACCTCCTAATGAAGATTGCTTATCAACTATTTGCTCAGCACCCTACACAAACTCTCCGCCTGGAGCACCTTGCAGATGTGTTCTGCCCATGAAAGTCGGCCTTCGCCTCAGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCACAGCTTGCTTCTGAAATTGCCACGGGGGTTTTTATGAGGCAAAGTCAAGTTCGGATTATGGGAGCCAATGCTGCAAGCCAGGATCCAGATAAAACTGAAGCCCTCATTGATTTGGTACCACTTGGGGAAAAGTTTGATAGCACTACAGCCCTTTTGACTTCTGAGAGATTTTGGCATAAACAGGTTGTTATAAAAGCTTCCTACTTTGGTGACTATGAGGTGTTATATGTGATCTATCCAGGTTTACCCCCGTCTCCTCCCTTACCGCCTTCAAGCATTTCCATGATAGACGGTGGCCCATATTCAAATAATGGCAATAATGGAAGAATTATAAAGCCCATTGGGGTTGACATACCAAAGAGGCAGCACAAAGGTGGACTTAGCGGGGGCATCATAGCTATTATTGCTCTTTCAGTTTTTCTTGCAGTTGTTTTATGCTCTGCGGCTGTTTGGGCCTTGTTCAAATGCAGACATCATGTAAGTCAACCTGCATCAACTCCAAGGGTTTCACCACGGTCTGTAACCAAGACACAAGGTACTGCTGGGTCGATAGGTGCTGGGATGTTTGCTTCGGCTTCATCATCATTTCAATCTAGCATTGCTGCTTATGCAGGATCTGCTAAGACTTTCAGTATCAATGACATTGAGAAAGCCACTGATAATTTTCATGCTTTGAGGATCCTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTAAAAAGGGAGGATCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGACTTCACCATAGAAATTTGGTTAAGTTGATTGGTATATGCACTGAGGTCAGCTTCCGGTGCCTGGTTTACGAACTCATTCCAAACAGCAGTGTGGAATCCCATTTACATGGAGTGGACAAGGAAAACAGCCAGCTTGATTGGAGTGCTCGAATTAAGATAGCTCTTGGTGCTGCTCGTGGTCTGGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAATCTAGCAATATACTGTTGGAAGATGATTTTACACCAAAAGTTTCTGATTTTGGATTAGCTAGAACTGCAGCAGATGAGGACAACAGACACATATCCACACGCGTCATGGGAACTTTCGGATATGTGGCTCCAGAGTATGCGATGACTGGACACCTTCTTGTGAAGAGTGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGCTTTTGACAGGAAGAAAACCTGTAGATATGTCGCAACCCCCTGGTCAAGAAAATCTTGTTGCATGGGCACGTCCATTACTCACAAGTAACGAAGGATTAGAAGCAATAATAGACCCTTCTCTGGGGACTGATGTGTCTTGGGATAGTGTGGCAAAAGTTGCAGCTATTGCTTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTTGTGAGTAATGAATGTGATGAAACAAAAGAAGCAGGTACAAGAAATTCTAGCCAGGAGGATTTATCTGTTGATTTGGACACTGTTTCTGGCCAAATACCAGACAGTTTCCAAGGCCAATTCTCTGGCACTAACTGTGTTTCTGGAGTTGATATCGAAAACGGGATGTCAGCATCAGAGATATTCAGCTCATCTGCAAGATTCGGAAGGCAATCATCTGGATCATTTAGACGACACTCGTACTCAGGTCCGCTGAGAACTCGAAGAAGCCGGAGGTTGTGGCAGATCATCAGAAGGCTTTCTGGTGGAAGTGTTAGTGAACATGGAACTATGTTCAAGCTATGA | 3786 | 0.4638 | MGMGVVLALILQLVNLCIIGYAVTVQGSKGSVISPSPAFPPVVHPRGETPGPIIHHGQTWGSNGPNSPSDPDGFVISPSPATLPVDASPSEGPALLPPRDPQRTIAPSSPEAPNGSFLPSPVTQPPPASAPTPQKIKGIEPSISPSPSPSNITLSPPYRAAPVPSTAQRSVSPSSMQPSPPQREAPAVRPPVSTPTAPAPAAIPSEKSPKNSPVSQPIEHGGLPPMVDKRNASKSHTPEPVSPAPVAIPSTKLPKISPATKPVGNGSFPPDVHSKGANKSHTTEPIAPVPVAVSLPKLSPVSLPTEHGSLPPTNSNTGHIQEPVSQAPVALPPAILPENSPFSQPIHRGSFPPNVHNRTVNKGHTHTPEPIPPPPVTSPARIFPINPPSVQPVTPAVSPSKLPVPVVSPALTPPRSIHWKEGGEPVSAPLYKIPKPLPAVVHSPAQAPAAHNSRQFHYPPEPLISSPKSPFNKEDHSPAYSPSTTFYKHYHSRNIVTSPAPESSYFVSPPSPEHQDHPIPPSLLPTSGRHAPPPMNTGSSVSPFAFPIVSPASQASPAPSPSFKISPHPTKAVLHPPQISPSQPPSKSPKKPVRPHVQALPPPPPNEDCLSTICSAPYTNSPPGAPCRCVLPMKVGLRLSVSLYTFFPLVSQLASEIATGVFMRQSQVRIMGANAASQDPDKTEALIDLVPLGEKFDSTTALLTSERFWHKQVVIKASYFGDYEVLYVIYPGLPPSPPLPPSSISMIDGGPYSNNGNNGRIIKPIGVDIPKRQHKGGLSGGIIAIIALSVFLAVVLCSAAVWALFKCRHHVSQPASTPRVSPRSVTKTQGTAGSIGAGMFASASSSFQSSIAAYAGSAKTFSINDIEKATDNFHALRILGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNSSVESHLHGVDKENSQLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSNEGLEAIIDPSLGTDVSWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDETKEAGTRNSSQEDLSVDLDTVSGQIPDSFQGQFSGTNCVSGVDIENGMSASEIFSSSARFGRQSSGSFRRHSYSGPLRTRRSRRLWQIIRRLSGGSVSEHGTMFKL* | 1262 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod03g1496 | 1261 | PANTHER | OS01G0750732 PROTEIN | 9 | 75 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 367 | 387 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 41 | 387 | - | - | |
Dod03g1496 | 1261 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 426 | 1261 | - | - | |
Dod03g1496 | 1261 | PANTHER | OS01G0750732 PROTEIN | 426 | 1261 | - | - | |
Dod03g1496 | 1261 | ProSitePatterns | Protein kinases ATP-binding region signature. | 879 | 901 | IPR017441 | GO:0005524 | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 552 | 605 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 139 | 155 | - | - | |
Dod03g1496 | 1261 | PANTHER | PROTEIN KINASE SUPERFAMILY PROTEIN | 9 | 75 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 442 | 484 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 499 | 539 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 59 | 73 | - | - | |
Dod03g1496 | 1261 | Pfam | Protein tyrosine and serine/threonine kinase | 875 | 1146 | IPR001245 | GO:0004672|GO:0006468 | |
Dod03g1496 | 1261 | Gene3D | Transferase(Phosphotransferase) domain 1 | 949 | 1173 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 578 | 605 | - | - | |
Dod03g1496 | 1261 | ProSiteProfiles | Protein kinase domain profile. | 873 | 1149 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Dod03g1496 | 1261 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 995 | 1007 | IPR008271 | GO:0004672|GO:0006468 | |
Dod03g1496 | 1261 | Gene3D | Phosphorylase Kinase; domain 1 | 844 | 948 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 470 | 484 | - | - | |
Dod03g1496 | 1261 | SUPERFAMILY | Protein kinase-like (PK-like) | 854 | 1147 | IPR011009 | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 179 | 198 | - | - | |
Dod03g1496 | 1261 | MobiDBLite | consensus disorder prediction | 306 | 323 | - | - | |
Dod03g1496 | 1261 | CDD | STKc_IRAK | 879 | 1147 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod03g1496 | Dod-Chr3 | 20028001 | 20043368 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod03g1496 | 184 | 1257 | Receptor kinase-like Gene Family | AT5G56890 | 51.182 | 0.0 | 850 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_Extensin | Dod03g1496 | PK_Tyr_Ser-Thr | 2.5e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod03g1496 | - | - | gmx:100802309 | 1647.48 |