Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1496 ATGGGGATGGGGGTGGTTTTGGCACTGATTCTGCAGTTGGTGAATCTCTGCATCATTGGCTATGCAGTGACAGTCCAAGGATCCAAAGGGTCTGTTATATCCCCATCTCCAGCATTCCCTCCTGTCGTTCATCCTAGAGGAGAAACACCTGGTCCTATCATCCATCATGGACAGACATGGGGAAGCAATGGACCTAACTCACCATCAGATCCAGATGGGTTTGTTATATCCCCATCTCCAGCAACCTTACCTGTGGATGCTTCCCCCAGTGAAGGACCTGCTCTTTTACCCCCAAGAGATCCACAGAGAACCATTGCCCCAAGCTCTCCAGAAGCACCAAATGGGTCATTCTTGCCTTCTCCAGTTACACAACCACCTCCTGCATCAGCTCCAACTCCTCAGAAGATAAAAGGAATTGAACCATCCATATCTCCTAGTCCTAGTCCAAGCAACATTACATTATCTCCCCCATATCGTGCTGCTCCTGTACCGTCAACCGCCCAACGGAGTGTGTCACCATCATCCATGCAACCAAGTCCACCTCAAAGGGAAGCACCTGCTGTTAGGCCCCCTGTGTCCACACCAACTGCTCCAGCACCAGCTGCAATACCTTCTGAAAAATCGCCAAAGAATTCGCCAGTCAGCCAGCCAATTGAACATGGAGGTTTGCCTCCTATGGTTGATAAGAGGAATGCAAGTAAGAGTCACACGCCAGAGCCAGTTTCACCAGCCCCGGTTGCAATACCTTCCACCAAATTGCCCAAAATTTCACCAGCAACTAAACCAGTTGGAAATGGAAGTTTTCCTCCTGATGTTCACAGCAAAGGTGCAAATAAAAGCCACACCACAGAGCCAATTGCACCAGTTCCTGTTGCAGTCAGTTTGCCCAAACTATCGCCAGTGAGTCTGCCAACTGAACATGGAAGTTTGCCTCCAACTAATTCCAATACGGGTCACATACAGGAGCCAGTTTCACAAGCCCCAGTTGCATTACCTCCTGCAATTCTGCCAGAAAATTCACCATTCAGCCAACCAATTCATCGGGGAAGTTTTCCTCCTAATGTTCATAACAGAACTGTAAATAAGGGTCACACTCACACCCCAGAGCCAATACCGCCACCACCAGTTACATCACCAGCAAGGATATTTCCAATAAATCCACCATCAGTCCAGCCAGTTACACCAGCAGTATCTCCATCAAAATTACCAGTGCCTGTTGTCTCTCCCGCATTAACTCCTCCTAGAAGCATCCATTGGAAAGAAGGCGGAGAACCAGTTTCAGCACCTTTGTACAAAATACCTAAGCCACTACCAGCTGTAGTACATTCCCCTGCTCAAGCCCCTGCTGCACACAATTCAAGGCAATTTCATTATCCTCCTGAGCCACTGATTTCTTCTCCTAAATCTCCTTTCAATAAAGAAGATCATTCTCCTGCATATTCACCTTCAACCACATTTTATAAGCATTATCATTCAAGGAACATAGTCACCAGCCCTGCTCCTGAATCATCATATTTCGTCTCTCCGCCCAGTCCAGAACACCAAGATCACCCAATTCCTCCCTCATTACTGCCCACAAGTGGACGACATGCTCCACCACCAATGAACACAGGTTCATCAGTTTCCCCGTTTGCATTCCCTATTGTGTCACCGGCAAGCCAGGCTTCACCTGCCCCTTCTCCATCATTCAAAATATCCCCTCACCCAACCAAAGCTGTATTGCATCCTCCGCAAATATCTCCTTCACAGCCTCCTTCCAAGAGTCCGAAGAAGCCCGTCCGGCCTCACGTTCAAGCCCTGCCTCCCCCACCTCCTAATGAAGATTGCTTATCAACTATTTGCTCAGCACCCTACACAAACTCTCCGCCTGGAGCACCTTGCAGATGTGTTCTGCCCATGAAAGTCGGCCTTCGCCTCAGTGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCACAGCTTGCTTCTGAAATTGCCACGGGGGTTTTTATGAGGCAAAGTCAAGTTCGGATTATGGGAGCCAATGCTGCAAGCCAGGATCCAGATAAAACTGAAGCCCTCATTGATTTGGTACCACTTGGGGAAAAGTTTGATAGCACTACAGCCCTTTTGACTTCTGAGAGATTTTGGCATAAACAGGTTGTTATAAAAGCTTCCTACTTTGGTGACTATGAGGTGTTATATGTGATCTATCCAGGTTTACCCCCGTCTCCTCCCTTACCGCCTTCAAGCATTTCCATGATAGACGGTGGCCCATATTCAAATAATGGCAATAATGGAAGAATTATAAAGCCCATTGGGGTTGACATACCAAAGAGGCAGCACAAAGGTGGACTTAGCGGGGGCATCATAGCTATTATTGCTCTTTCAGTTTTTCTTGCAGTTGTTTTATGCTCTGCGGCTGTTTGGGCCTTGTTCAAATGCAGACATCATGTAAGTCAACCTGCATCAACTCCAAGGGTTTCACCACGGTCTGTAACCAAGACACAAGGTACTGCTGGGTCGATAGGTGCTGGGATGTTTGCTTCGGCTTCATCATCATTTCAATCTAGCATTGCTGCTTATGCAGGATCTGCTAAGACTTTCAGTATCAATGACATTGAGAAAGCCACTGATAATTTTCATGCTTTGAGGATCCTTGGAGAAGGTGGTTTTGGGCGTGTTTACAGTGGTATCCTTGAAGATGGGACAAAAGTGGCAGTCAAGGTTCTAAAAAGGGAGGATCATCATGGTGATCGTGAATTCTTATCTGAAGTTGAGATGCTTAGCCGACTTCACCATAGAAATTTGGTTAAGTTGATTGGTATATGCACTGAGGTCAGCTTCCGGTGCCTGGTTTACGAACTCATTCCAAACAGCAGTGTGGAATCCCATTTACATGGAGTGGACAAGGAAAACAGCCAGCTTGATTGGAGTGCTCGAATTAAGATAGCTCTTGGTGCTGCTCGTGGTCTGGCTTATTTGCATGAAGATTCAAGTCCCCATGTCATACATAGGGACTTCAAATCTAGCAATATACTGTTGGAAGATGATTTTACACCAAAAGTTTCTGATTTTGGATTAGCTAGAACTGCAGCAGATGAGGACAACAGACACATATCCACACGCGTCATGGGAACTTTCGGATATGTGGCTCCAGAGTATGCGATGACTGGACACCTTCTTGTGAAGAGTGACGTCTACAGCTATGGTGTTGTTCTTCTCGAGCTTTTGACAGGAAGAAAACCTGTAGATATGTCGCAACCCCCTGGTCAAGAAAATCTTGTTGCATGGGCACGTCCATTACTCACAAGTAACGAAGGATTAGAAGCAATAATAGACCCTTCTCTGGGGACTGATGTGTCTTGGGATAGTGTGGCAAAAGTTGCAGCTATTGCTTCAATGTGTGTACAACCAGAGGTATCAGACCGTCCTTTCATGGGCGAGGTTGTTCAGGCTTTAAAACTTGTGAGTAATGAATGTGATGAAACAAAAGAAGCAGGTACAAGAAATTCTAGCCAGGAGGATTTATCTGTTGATTTGGACACTGTTTCTGGCCAAATACCAGACAGTTTCCAAGGCCAATTCTCTGGCACTAACTGTGTTTCTGGAGTTGATATCGAAAACGGGATGTCAGCATCAGAGATATTCAGCTCATCTGCAAGATTCGGAAGGCAATCATCTGGATCATTTAGACGACACTCGTACTCAGGTCCGCTGAGAACTCGAAGAAGCCGGAGGTTGTGGCAGATCATCAGAAGGCTTTCTGGTGGAAGTGTTAGTGAACATGGAACTATGTTCAAGCTATGA 3786 0.4638 MGMGVVLALILQLVNLCIIGYAVTVQGSKGSVISPSPAFPPVVHPRGETPGPIIHHGQTWGSNGPNSPSDPDGFVISPSPATLPVDASPSEGPALLPPRDPQRTIAPSSPEAPNGSFLPSPVTQPPPASAPTPQKIKGIEPSISPSPSPSNITLSPPYRAAPVPSTAQRSVSPSSMQPSPPQREAPAVRPPVSTPTAPAPAAIPSEKSPKNSPVSQPIEHGGLPPMVDKRNASKSHTPEPVSPAPVAIPSTKLPKISPATKPVGNGSFPPDVHSKGANKSHTTEPIAPVPVAVSLPKLSPVSLPTEHGSLPPTNSNTGHIQEPVSQAPVALPPAILPENSPFSQPIHRGSFPPNVHNRTVNKGHTHTPEPIPPPPVTSPARIFPINPPSVQPVTPAVSPSKLPVPVVSPALTPPRSIHWKEGGEPVSAPLYKIPKPLPAVVHSPAQAPAAHNSRQFHYPPEPLISSPKSPFNKEDHSPAYSPSTTFYKHYHSRNIVTSPAPESSYFVSPPSPEHQDHPIPPSLLPTSGRHAPPPMNTGSSVSPFAFPIVSPASQASPAPSPSFKISPHPTKAVLHPPQISPSQPPSKSPKKPVRPHVQALPPPPPNEDCLSTICSAPYTNSPPGAPCRCVLPMKVGLRLSVSLYTFFPLVSQLASEIATGVFMRQSQVRIMGANAASQDPDKTEALIDLVPLGEKFDSTTALLTSERFWHKQVVIKASYFGDYEVLYVIYPGLPPSPPLPPSSISMIDGGPYSNNGNNGRIIKPIGVDIPKRQHKGGLSGGIIAIIALSVFLAVVLCSAAVWALFKCRHHVSQPASTPRVSPRSVTKTQGTAGSIGAGMFASASSSFQSSIAAYAGSAKTFSINDIEKATDNFHALRILGEGGFGRVYSGILEDGTKVAVKVLKREDHHGDREFLSEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNSSVESHLHGVDKENSQLDWSARIKIALGAARGLAYLHEDSSPHVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEDNRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSNEGLEAIIDPSLGTDVSWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDETKEAGTRNSSQEDLSVDLDTVSGQIPDSFQGQFSGTNCVSGVDIENGMSASEIFSSSARFGRQSSGSFRRHSYSGPLRTRRSRRLWQIIRRLSGGSVSEHGTMFKL* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1496 1261 PANTHER OS01G0750732 PROTEIN 9 75 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 367 387 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 41 387 - -
Dod03g1496 1261 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 426 1261 - -
Dod03g1496 1261 PANTHER OS01G0750732 PROTEIN 426 1261 - -
Dod03g1496 1261 ProSitePatterns Protein kinases ATP-binding region signature. 879 901 IPR017441 GO:0005524
Dod03g1496 1261 MobiDBLite consensus disorder prediction 552 605 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 139 155 - -
Dod03g1496 1261 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 9 75 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 442 484 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 499 539 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 59 73 - -
Dod03g1496 1261 Pfam Protein tyrosine and serine/threonine kinase 875 1146 IPR001245 GO:0004672|GO:0006468
Dod03g1496 1261 Gene3D Transferase(Phosphotransferase) domain 1 949 1173 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 578 605 - -
Dod03g1496 1261 ProSiteProfiles Protein kinase domain profile. 873 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1496 1261 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Dod03g1496 1261 Gene3D Phosphorylase Kinase; domain 1 844 948 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 470 484 - -
Dod03g1496 1261 SUPERFAMILY Protein kinase-like (PK-like) 854 1147 IPR011009 -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 179 198 - -
Dod03g1496 1261 MobiDBLite consensus disorder prediction 306 323 - -
Dod03g1496 1261 CDD STKc_IRAK 879 1147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1496 Dod-Chr3 20028001 20043368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1496 184 1257 Receptor kinase-like Gene Family AT5G56890 51.182 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Dod03g1496 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1496 - - gmx:100802309 1647.48