Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1489 ATGCCTCGTGGAGCACTCCAAGTGGAACCTCCTTCAAATGATGAGTCCAAGAATTCGTCCCCACAGCACAAATCTGAAGCATTTTTGTTCTGCCTTGGAGCGATAGTAGTGCTCATCATATTGTTGATTTTCATTTTTGTATTTTGGAAGCGTATCAAAGGGTCAGCACAGCAGAGGAGAAAGACAGCTCCAACAAAAGGGAAGCAAGGGAAACGTAATGAATCAGCAGAGGTGATGGAGATGATATTTCCATCTAAACAACAGCTAGGATCCATGGAGTTATTAAGTGGGAACCTTCGGACAATTAGCTACTTTGACTACCAGATCTTGAGAGAGGCAACCGAGAAATTTTCTCCTGCTAATTTTCTTGGAAGAGGTGGATTTGGTCCTGTCTATCGGGGAAAGTTGGTAGATGGAAGACTGATTGCTGTTAAGAAATTGTCCCTCAACAACTCCCAACAGGGAGAAAAAGAATTTCTGGCAGAGGTGAGATTGATCACTAGTATCCAACACAAAAATCTTGTTCGCCTTATTGGATGCTGCATAGATGGTCCTCAAAGGATACTTGTGTATGAATACATGAACAACAGGAGTTTAGACCTCTTCATAAATGGCAACAGTGATCAATTTCTGAATTGGAGCACCAGGTTCCAAATTATTCTTGGAGTGGCACGGGGACTGCAATACCTTCATGAGGATTCACACCTGAGAATCGTTCACCGAGATATCAAAGCAAGTAACATTCTTCTTGATGACAAGTTTCACGCTAAGATTGGAGACTTTGGGCTTGCTAGGTTCTTCCCTGAAGATCAAGCTTACCTTAGCACACAATTTGCTGGAACATTAGGTTATACAGCTCCTGAATACGCTATTAGAGGAGAACTGTCAGAAAAGGCAGATATCTATAGTTTTGGGGTTCTAGTGCTTGAAATCATTTGTTGCAGGAAAAATACGGATCATACTCTGCCATCAGAGATGCAGTACCTCCCTGAATACGCATGGAAACTTTACGAAAGTTCAAAGATAATGGACCTTGTAGATTCAAAGCTGCGAGAACATGGGTTTGTAGACAAGGATGTGATGCAAGCATTCCATGTGGCATTCTTATGCCTTCAGCCTCTTGCACATTTGAGACCTCCCATGTCAGAGATTGTAGCATTGTTGACATTCAAAATTGAAATGGTCACAACACCAATGAGGCCAGCCTTCCTTGATCGAAGGCGCAAAAAGGATGATGAGAACCATTCTCCCGGAGCAATATCCCATGATGGGCCACTCACAGTGATTTCTATCAGTACCAAAACTAAACCATCAACCTGA 1320 0.425 MPRGALQVEPPSNDESKNSSPQHKSEAFLFCLGAIVVLIILLIFIFVFWKRIKGSAQQRRKTAPTKGKQGKRNESAEVMEMIFPSKQQLGSMELLSGNLRTISYFDYQILREATEKFSPANFLGRGGFGPVYRGKLVDGRLIAVKKLSLNNSQQGEKEFLAEVRLITSIQHKNLVRLIGCCIDGPQRILVYEYMNNRSLDLFINGNSDQFLNWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFHAKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIICCRKNTDHTLPSEMQYLPEYAWKLYESSKIMDLVDSKLREHGFVDKDVMQAFHVAFLCLQPLAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRRKKDDENHSPGAISHDGPLTVISISTKTKPST* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1489 439 SUPERFAMILY Protein kinase-like (PK-like) 96 391 IPR011009 -
Dod03g1489 439 PANTHER RECEPTOR-LIKE KINASE 94 404 - -
Dod03g1489 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Dod03g1489 439 ProSiteProfiles Protein kinase domain profile. 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1489 439 Pfam Protein tyrosine and serine/threonine kinase 122 385 IPR001245 GO:0004672|GO:0006468
Dod03g1489 439 SMART serkin_6 117 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1489 439 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 94 404 - -
Dod03g1489 439 MobiDBLite consensus disorder prediction 1 21 - -
Dod03g1489 439 CDD STKc_IRAK 123 389 - -
Dod03g1489 439 Gene3D Transferase(Phosphotransferase) domain 1 194 397 - -
Dod03g1489 439 MobiDBLite consensus disorder prediction 405 425 - -
Dod03g1489 439 Gene3D Phosphorylase Kinase; domain 1 90 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1489 Dod-Chr3 19858590 19863364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1489 93 404 Receptor kinase-like Gene Family AT1G56120 47.756 1.34e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dod03g1489 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1489 - - gmx:100799624 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2327 05 49546450 49549049 Dod03g1489 03 19858590 19863364 PCT