Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1481 ATGGCAGTGGATCTGGTGGGAGTTCCAAGGGTGAGGATGGAAGAGCATCAAACAATACAAGAAGCTGCTTCGGCTGGATTGAAGAGCATGGAGCATCTGATTCGACTCCTTGCGTCTCAGACTCCTTCTTCTTCTTCTTCTTCATTTTCTTATAATTCTCCTTCTACTTCTTCATCTTCGTCCTTACACAACAACAACCTCAACCTTAACTGCTCCGAACTCACCGACTTCACCGTCTCCAAGTTCAAGCAAGTCATTAACCTACTAAACCGCACGGGCCACGCTCGATTCCGCCGCGCCCCACCACAACCCAAACCCGAGGCCCAGATTCAGGGCCCCGGCTTGACTCTTGATTTCGCCAAGCCCAGGATTCTCAACTCGAAGCCCGTCGATGTTAAGGACGAAAACGCACTTAGCATATCTCCTCCCGTTTCGACCACCACCTCCTCTTTCATGTCCTCCATCACCGGCGACGCCAGCGTCTCCGACGGCAAGATAGGCCCATTCCTCACCCCTCCGGCGACGGCCCCTTCAGCCGGCAAGCCCCCTCTCTCCTCCTCTCACCGGAAAAGGTGCCACGACGCCGCATTCTCCGGCAAGGCTTCCTCCTCCGGCCAGTGTCATTGCTCCAAAAGAAGGAAATCACGTGTGAAACGAACGGTCCGTGTGCCGGCGATAAGCTCGAAGATCGCCGATATACCGCCGGACGAGTTCTCGTGGAGGAAGTACGGTCAAAAACCTATCAAGGGCTCACCTTACCCACGTGGATACTATAAGTGCAGCACGGTGAGAGGGTGCCCGGCGAGGAAGCACGTGGAGCGAGCGCAAGACGATCCCAACATGCTGATAGTGACCTACGAGGGAGAGCACCGTCATAACCCCCAGCCCCACCCGCCGGAAATCGTCACTGCCGCCGCCGCTTTCACCCTCCGATCGAGCTGA 942 0.5605 MAVDLVGVPRVRMEEHQTIQEAASAGLKSMEHLIRLLASQTPSSSSSSFSYNSPSTSSSSSLHNNNLNLNCSELTDFTVSKFKQVINLLNRTGHARFRRAPPQPKPEAQIQGPGLTLDFAKPRILNSKPVDVKDENALSISPPVSTTTSSFMSSITGDASVSDGKIGPFLTPPATAPSAGKPPLSSSHRKRCHDAAFSGKASSSGQCHCSKRRKSRVKRTVRVPAISSKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPNMLIVTYEGEHRHNPQPHPPEIVTAAAAFTLRSS* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1481 313 MobiDBLite consensus disorder prediction 163 214 - -
Dod03g1481 313 SUPERFAMILY WRKY DNA-binding domain 232 294 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod03g1481 313 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 296 - -
Dod03g1481 313 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 296 IPR044810 GO:0003700
Dod03g1481 313 SMART WRKY_cls 234 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1481 313 Pfam Plant zinc cluster domain 189 232 IPR018872 -
Dod03g1481 313 ProSiteProfiles WRKY domain profile. 229 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1481 313 MobiDBLite consensus disorder prediction 42 62 - -
Dod03g1481 313 Pfam WRKY DNA -binding domain 236 292 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod03g1481 313 Gene3D WRKY domain 220 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1481 Dod-Chr3 19728561 19730320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1481 1 293 WRKY Transcription Factor Family AT2G24570 52.905 1.04e-97 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod03g1481 WRKY 4.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1481 - - gmx:732587 374.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1481 03 19728561 19730320 Dod03g1481 03 19728561 19730320 ECH
Dod05g2312 05 49407265 49409228 Dod03g1481 03 19728561 19730320 PCT