Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1474 ATGAGTTTCCCGAATGTCTCGCCTCGCCGGTCAGCGGCGGCGGAGATCCACGACTTGGAGACCGGACCGCCGTTTGGACGCTCAGGCAGCGGCTTCGACGACGGCGATTCCTCCGATCCCTTCGACATCGCCAGAACTAAGAACGCCTCGATTGAACGCCTTCGGAGATGGAGGCAAGCGGCCCTTGTGCTTAATGCTTCTCGTCGATTTCGTTACACCTTGGACTTGAAAAAAGAAGAGGAGAAAAGACAAATATTGAGAAAGATTAGAGCACATGCACAAGCCATCAGGGCAGCATATCTTTTCAAAGCAGCTGGGGGCGGCCTAGTGAATGAAGCCACAAAACCTCCACCGACATCCAGTGGTGAATTTCCAATTGGACAAGAGCAACTTGCTTCAGTTTCAAGGGAGCATGATACTGCTGCTCTGCAGCAATATGGAGGGGTTGTAGGGATATCGAATTTGCTGAAAACCAATATAGAGAAGGGGATACATGGTGATGATGCTGACTTACTAAAACGAAGGAATGCATTTGGTTCCAACAACTATCCTCGAAAGAAAGGAAGAAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCTTGGTTATTTTAATGGTAGCTGCAGCAGCTTCATTGGCATTGGGGATAAAATCGGAGGGTATTAAGGAAGGATGGTACGATGGAGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGACTATAAGCAGTCTCTTCAGTTTCGAGACCTAAATGAAGAGAAGAGAAATATACGGCTGCAGGTTATCAGAGGTGGTAGAAGGGTAGAGATCTCGATTTATGATATTGTTGTTGGTGATGTCATACCCCTTAATATTGGTGACCAGGTCCCTGCTGATGGAATTCTGATCACTGGTCACTCTCTTGCAATTGATGAGTCAAGTATGACTGGGGAGAGCAAAATTGTCCACAAAGATTCCAGAGACCCTTTTTTGATGTCAGGGTGTAAAGTTGCTGATGGCAGTGGCACTATGCTGGTTACTGGTGTTGGTATAAATACTGAGTGGGGGCTGCTGATGGCTAGCATCTCAGAAGACACCGGTGAAGAAACACCTTTGCAGGTCCGCTTAAATGGTGTAGCCACCTTCATCGGTATTGTTGGTCTATCTGTTGCTGTTGTTGTCCTGATTGTGCTACTGGCCAGATTTTTCTCTGGCCATACCAAAAAGCCAGATGGGAGTGTTCAGTTTAAAGCAGGCACGACGAAAGTTAGTGATGCAGTTGATGGAGCAATTAAGATAATAACTGTTGCGGTCACCATTGTAGTGGTTGCAGTACCTGAAGGGCTCCCATTAGCAGTTACATTAACACTGGCATACTCAATGAGGAAAATGATGGCAGATAAAGCTTTGGTGAGGAGGCTTTCTGCTTGCGAGACGATGGGCTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACGATGAATCAGATGACTGTGGTTGATGCTTATGCTGGCGGGAAGAAGATTGATCCTCTGGACAGCAAGTCAAAGCTCTCTCCCAAGATCCACACTTTGCTCATTGAAGGTATTGCACAGAACACTAATGGCAGTGTTTACGTACCCGAGGGAGGTAATGATGCTGAGGTTTCTGGATCACCAACAGAAAAAGCAATTTTACATTGGGGAATACAGCTTGGTATGAATTTTGAGGCTGCCAGATCAGAGTCATCAATTCTTCATGTCTTCCCTTTCAATTCAGAGAAAAAACGAGGCGGGGTTGCAATACAGACGTCTGACTCTGAAGTCCATATACATTGGAAAGGTGCTGCTGAAATAGTCCTAGCTTGCTGTACATGGTATATTGATGCAAATGACCAGTTGGTGGAGATGGATGAAGAGAAGATGACATTTTTCAAAAAAGCTATTGAAGACATGGCTGCTGAAAGTCTACGTTGTGTTGCCATTGCATATCGAAAATATGAAAAGGAGAATGTTCCAGCTAGTGAAGATTTACTAGCTTACTGGTCTTTACCAGAAGATGATCTTATTTTGCTAGCTATTGTTGGTCTGAAGGATCCTTGTCGGTCTGGAGTCAAAGATGCAGTGCAGCTTTGCCAAAAAGCTGGGGTTAAGGTAAGAATGGTCACTGGTGATAATGTCAAAACTGCAAAAGCAATTGCTGTGGAATGCGGAATACTTAATTCACTTGCTGATGCTACAGAGCCGACCATCATTGAAGGAAAAAATTTTCGTGCCTTGTCAGATTCAGAGAGAGAAAAAATTGCTGAATCAATATCGGTTATGGGACGGTCATCTCCTAATGACAAGCTGCTGCTTGTGCAAGCATTGAGGAAGAAGGGCCATGTTGTGGCTGTAACTGGGGATGGAACAAATGATGCTCCTGCACTACATGAGGCTGATATAGGTCTTGCAATGGGTATTCAAGGCACAGAAGTTGCCAAAGAGAGCTCTGATATTATCATCTTGGATGACAATTTCGCTTCAGTTGTGAAGGTTGTGAGATGGGGGCGCTCAGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTAGCAGCTCTTGTAATTAATGTTGTTGCTGCAGTTTCCTCTGGTGATGTTCCACTAAATGCAGTGCAGCTTTTGTGGGTAAACCTTATCATGGATACTCTCGGAGCACTAGCATTAGCAACTGAACCACCGACTGATCACCTGATGGAACGGCCTCCAGTGGGCCGAAGAGAACCACTCATAACAAATATTATGTGGAGGAATTTGCTGACGCAGGCAATGTACCAAGTGTCTGTCTTGCTTGTTCTGAATTTCCGAGGTAGGAGCATCCTGGGTCTGGGGGGTGACAATGCACATGCAATCAAAGTGAAAAACACACTGATCTTCAATGCATTTGTTCTGTGTCAAATCTTTAATGAATTTAATGCTCGAAAGCCGGATGAATTCAACATATTTCAAGGAGTCACGAAAAACTACCTCTTTATGGGGATAGTGGGATTAACTGTTGTGCTTCAGATTATCATCATTGAATTTCTCGGGAAGTTCACTTCAACAGTGAGGCTTAATTGGAAGCAGTGGATCATCTCTGTCGTTATTGGACTCATTAGTTGGCCTCTTGCTGTGGTTGGGAAATTGATACCAGTACCAGAGACTCCCATCAACAACGCATTTTCAAGATTCCTTTTTTGTAGACTTTTGAGGAAGGAACCTGAGGCTTCTCAATAG 3261 0.4422 MSFPNVSPRRSAAAEIHDLETGPPFGRSGSGFDDGDSSDPFDIARTKNASIERLRRWRQAALVLNASRRFRYTLDLKKEEEKRQILRKIRAHAQAIRAAYLFKAAGGGLVNEATKPPPTSSGEFPIGQEQLASVSREHDTAALQQYGGVVGISNLLKTNIEKGIHGDDADLLKRRNAFGSNNYPRKKGRSFLMFVWDACKDLTLVILMVAAAASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIRLQVIRGGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDSRDPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLSVAVVVLIVLLARFFSGHTKKPDGSVQFKAGTTKVSDAVDGAIKIITVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVDAYAGGKKIDPLDSKSKLSPKIHTLLIEGIAQNTNGSVYVPEGGNDAEVSGSPTEKAILHWGIQLGMNFEAARSESSILHVFPFNSEKKRGGVAIQTSDSEVHIHWKGAAEIVLACCTWYIDANDQLVEMDEEKMTFFKKAIEDMAAESLRCVAIAYRKYEKENVPASEDLLAYWSLPEDDLILLAIVGLKDPCRSGVKDAVQLCQKAGVKVRMVTGDNVKTAKAIAVECGILNSLADATEPTIIEGKNFRALSDSEREKIAESISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMERPPVGRREPLITNIMWRNLLTQAMYQVSVLLVLNFRGRSILGLGGDNAHAIKVKNTLIFNAFVLCQIFNEFNARKPDEFNIFQGVTKNYLFMGIVGLTVVLQIIIIEFLGKFTSTVRLNWKQWIISVVIGLISWPLAVVGKLIPVPETPINNAFSRFLFCRLLRKEPEASQ* 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1474 1086 Gene3D - 197 1049 - -
Dod03g1474 1086 Gene3D - 499 697 IPR023299 GO:0000166
Dod03g1474 1086 SUPERFAMILY Calcium ATPase, transmembrane domain M 148 1060 IPR023298 -
Dod03g1474 1086 Gene3D - 486 842 IPR023214 -
Dod03g1474 1086 Gene3D - 170 365 - -
Dod03g1474 1086 SUPERFAMILY Calcium ATPase, transduction domain A 267 362 IPR008250 -
Dod03g1474 1086 Pfam haloacid dehalogenase-like hydrolase 486 811 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 313 327 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 821 833 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 712 722 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 797 816 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 690 701 - -
Dod03g1474 1086 PRINTS P-type cation-transporting ATPase superfamily signature 489 503 - -
Dod03g1474 1086 PANTHER CALCIUM-TRANSPORTING ATPASE 30 1075 - -
Dod03g1474 1086 MobiDBLite consensus disorder prediction 1 41 - -
Dod03g1474 1086 ProSitePatterns E1-E2 ATPases phosphorylation site. 491 497 IPR018303 -
Dod03g1474 1086 PANTHER CATION TRANSPORTING ATPASE 30 1075 - -
Dod03g1474 1086 Pfam Cation transporting ATPase, C-terminus 882 1058 IPR006068 -
Dod03g1474 1086 Pfam Cation transporter/ATPase, N-terminus 147 214 IPR004014 -
Dod03g1474 1086 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 137 1060 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Dod03g1474 1086 SMART Cation_ATPase_N_a_2 145 219 IPR004014 -
Dod03g1474 1086 Pfam Ca2+-ATPase N terminal autoinhibitory domain 38 81 IPR024750 GO:0005516
Dod03g1474 1086 SUPERFAMILY HAD-like 487 902 IPR036412 -
Dod03g1474 1086 PRINTS Sodium/potassium-transporting ATPase signature 232 252 - -
Dod03g1474 1086 PRINTS Sodium/potassium-transporting ATPase signature 608 626 - -
Dod03g1474 1086 PRINTS Sodium/potassium-transporting ATPase signature 482 503 - -
Dod03g1474 1086 Gene3D - 49 104 - -
Dod03g1474 1086 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 496 694 IPR023299 GO:0000166
Dod03g1474 1086 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 429 513 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g1474 1086 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 763 877 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g1474 1086 SFLD Haloacid Dehalogenase 471 849 - -
Dod03g1474 1086 Pfam E1-E2 ATPase 267 467 - -
Dod03g1474 1086 SFLD p-type atpase 471 849 IPR044492 -
Dod03g1474 1086 CDD P-type_ATPase_Ca_PMCA-like 171 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1474 Dod-Chr3 19566693 19584613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1474 24 1074 Primary Pumps ATPases AT5G57110 74.504 0.0 1589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1474 K01537 - gmx:100792945 1818.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1474 03 19566693 19584613 Dod03g1474 03 19566693 19584613 ECH
Dod05g2305 05 49347277 49364017 Dod03g1474 03 19566693 19584613 PCT