Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1457 ATGCAGGATACGGAGAAGAAGATAAATGACAGAGAATTTAGAAAATCTAGTCATCCAAAGGAACATACTGATTCAAAGCTTGATTCATCACTGAGATTCAAAACAAGTAGCACAAAACGCCAAGGGAATAAGCATAAATTGAAATCAAAATCTCATAAACTCAGAGTTGGCACAAACCCATTGAGGAGGGCAGTTACCGATTCTTCCAACAAGGGATCAATCAAGAATTCTTCAAATAATAAGTTGATTATTAGGCAAAACATGGATAAAAATGATGGGAAATCTTCACAGATGCTGTCTTCAACAAAGCTAGAGGGGGAAAATTTTTCTCTTTGTTCTGTAAAAGAGGGAAAAGATGTTGCTGGGGAGGGGAAGATTCAAAAACTTAAGAGAAGGAATAAAAGGCAAAGGGGTAATGTGGATCTTGATGATGCTTCACGCCTGCAGAGGAGAACAAGGTACCTCTTAATCAAAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAAAGTCGAGAAAAGATTAGGCCAGAAAAGGAGCTACAAAGAGCAAAGAAGCAGATTTTAAAATGTAAACTTGGTATTCGTGATGCCATTCGCCAGCTGGATTCTCTTAGTTCAGTGGGTAGCATTGAAGATTCTGTCATTGCTCCAGATGGATCTGTTTATCATGAACATATATTCTGTGCAAACTGCAAATTGCGTGAAGCTTTCCCTGATAATGATATTATACTATGTGATGGCACATGCAATCGTGCTTTTCACCAAAGATGCCTCAATCCTCCTTTGGACACTGAAAATATTCCTCCTGGAGACCAAGGCTGGTTTTGCAAGTTTTGTGAATGTAAGATGGAAATACTGGAGAAAACAAATGCTCATCTTGGGACTCAATTCTCCTTGGATAGTACTTGGCAGGATGTATTCAAGGAAGAGGCTGCAATACCTGATGGTGACACCGCATTACTAAATCCAGAAGAAGAATGGCCATCAGATGATCCTGAAGACGACGATTATAATCCAGACAGGAGAGAAAACAGTCACAACATCAATGCAGAAGGAACTGATGACAATTTATCTGATTCAAGCAGTTCTACCAGTATTTGGTCCTTAAATGGCGAATATTCTCATGTAGATGAAGGTGTTGGCCATGAGTATCTTTCTGGTAATAGCTGCATAGATTCTGATGAAACTGGGGAAATAGCAAGTGGCCGCAGGCAGCGGAAAGCAGTTGACTACAGGAAACTTTATGATGAAATGTTTAAAGATGCTCCTCCATGTGAACAAGTGAGTGAAGATGAAGACTGGGGTCCTGGCAAAAGAAAGCGAAGAGAGAAGGAATCTGATGCTGCTAATACTCTAATGACTCTGCATGAAAGTGATAATAAATATTCCAATAATGAGAACAATGATGCAATAAGAGAGGGTTCACACATGCATATAAAAAGGCCTTGTTTCAGGATTCCACTTGATGCAGTTGAGAAGCTTCGCCAAGTTTTTGCAGAGAATGAACTTCCTCCGAGATCCGTGAAGGAAGATCTTTCAAAAGAGTTGGGAATTGATGCTGCGAAGGTTAGCAAATGGTTCAAAAATGCACGTTACCTAGCACTTAAAACCAGGAAGCATCAAGTGGACGGAGTAGAACAGCCTCAGAGTTTCAGTAAGACCCCAAAGGATTCTAGATCACAAAATGTGGACAAAGATGAACTTCCAAATAGATCAAAGGCCTCTAATATTACCGCGATCCATTCCCAGAATAATGGTAAAAATGTTAATGGTGGAGAGAAAACAAAAGCGTCTAGTAGTCATTTGAAGAAGAGGCAACCAAAAATATCTCCCCACAAGACAGGAGAAAATGGCAACAAGAACTTCAATGAGGTCAGTGATAATGTTAGCTTGAAGAAGTTGGTGAAAGGAAGGAAAAGGAAGGTGAATTTTATATTTGAAGGAGACTCTAAGACAGCAGAGTTGGAATTTGAAAGACTCAGCAAATTGAAGATTAAACTAGACTGCATTAAGCAGAAGTTATCTGAAGTTCAACACTACATAGCAAAGGGTTCAAATGGACCCTATTCTAATCAACCGTCTGTTGTATATGTGCCCACAGCGGAGTTAAGGGAAAAGGTTAAATGA 2151 0.3966 MQDTEKKINDREFRKSSHPKEHTDSKLDSSLRFKTSSTKRQGNKHKLKSKSHKLRVGTNPLRRAVTDSSNKGSIKNSSNNKLIIRQNMDKNDGKSSQMLSSTKLEGENFSLCSVKEGKDVAGEGKIQKLKRRNKRQRGNVDLDDASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILKCKLGIRDAIRQLDSLSSVGSIEDSVIAPDGSVYHEHIFCANCKLREAFPDNDIILCDGTCNRAFHQRCLNPPLDTENIPPGDQGWFCKFCECKMEILEKTNAHLGTQFSLDSTWQDVFKEEAAIPDGDTALLNPEEEWPSDDPEDDDYNPDRRENSHNINAEGTDDNLSDSSSSTSIWSLNGEYSHVDEGVGHEYLSGNSCIDSDETGEIASGRRQRKAVDYRKLYDEMFKDAPPCEQVSEDEDWGPGKRKRREKESDAANTLMTLHESDNKYSNNENNDAIREGSHMHIKRPCFRIPLDAVEKLRQVFAENELPPRSVKEDLSKELGIDAAKVSKWFKNARYLALKTRKHQVDGVEQPQSFSKTPKDSRSQNVDKDELPNRSKASNITAIHSQNNGKNVNGGEKTKASSSHLKKRQPKISPHKTGENGNKNFNEVSDNVSLKKLVKGRKRKVNFIFEGDSKTAELEFERLSKLKIKLDCIKQKLSEVQHYIAKGSNGPYSNQPSVVYVPTAELREKVK* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1457 716 MobiDBLite consensus disorder prediction 62 99 - -
Dod03g1457 716 PANTHER POLYCOMB PROTEIN PCL 1 686 - -
Dod03g1457 716 MobiDBLite consensus disorder prediction 1 99 - -
Dod03g1457 716 MobiDBLite consensus disorder prediction 358 372 - -
Dod03g1457 716 MobiDBLite consensus disorder prediction 580 604 - -
Dod03g1457 716 SUPERFAMILY Homeodomain-like 488 550 IPR009057 -
Dod03g1457 716 Pfam PHD-finger 235 290 IPR019787 -
Dod03g1457 716 ProSitePatterns Zinc finger PHD-type signature. 236 287 IPR019786 -
Dod03g1457 716 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 227 284 IPR013083 -
Dod03g1457 716 ProSiteProfiles 'Homeobox' domain profile. 485 545 IPR001356 GO:0003677
Dod03g1457 716 ProSiteProfiles Zinc finger PHD-type profile. 233 290 IPR019787 -
Dod03g1457 716 MobiDBLite consensus disorder prediction 547 631 - -
Dod03g1457 716 Pfam Homeodomain 498 540 IPR001356 GO:0003677
Dod03g1457 716 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 1 686 - -
Dod03g1457 716 SMART HOX_1 487 549 IPR001356 GO:0003677
Dod03g1457 716 CDD homeodomain 488 549 IPR001356 GO:0003677
Dod03g1457 716 Gene3D - 487 551 - -
Dod03g1457 716 CDD PHD_PRHA_like 235 287 IPR045876 -
Dod03g1457 716 MobiDBLite consensus disorder prediction 321 372 - -
Dod03g1457 716 SMART PHD_3 235 288 IPR001965 -
Dod03g1457 716 MobiDBLite consensus disorder prediction 38 57 - -
Dod03g1457 716 MobiDBLite consensus disorder prediction 433 455 - -
Dod03g1457 716 MobiDBLite consensus disorder prediction 1 29 - -
Dod03g1457 716 SUPERFAMILY FYVE/PHD zinc finger 227 293 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1457 Dod-Chr3 19172311 19179781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1457 140 556 Homeobox Transcription Factor Family AT4G29940 57.944 4.82e-156 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Dod03g1457 PHD 4.6e-11 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1457 - - gmx:100787118 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2290 05 49142931 49148887 Dod03g1457 03 19172311 19179781 PCT