Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1424 ATGGAGGGGCAACCAGCAAAACGAAGGCGTGTGTACTCACTTGAACCAAACAAAGTAGTACAAGCAGCGTTTACTAGGAAATATTTGAACTATTTAGTTCCAGCTCTGATGAAGATCAAGGAAAGGAGTACTTCAGCAGAACAACAACAAAACAACATCCATTGTGATGTCAAGGATGTTGTCAAGTATGAAGTGGACATGGCAATGGTCTTCTCAGCTCAAGGTTTTGCTTGGAGCAATGCTCTAAAAACCAACCTTCAAAGGGGGGAAGGTGGCAACAATGTTGATAGTGAAGGTTCATTGATTAGGACCAATGATTATGATGACCAAAATGAAATGGCCCCACTACCACTATCCAGTTCAAAGTCTCATGCTAATAAGATTTTGGTGAGCAATAAGTACAAGGACATGCCAGGATTAATGAAAGAAGATGAAGATGATGATGAGGTCATGAATAGCCAGTTGAGGAGCCTAAGAATCTTGATACCTGGAGGAGAAGAGATGTGCAATGAACAAATGGTTGCAGAATTAGAGAGCTATATAAGCTGCTTGCAAATGCAGGTGAATATTCTTCAATGCCTTGCAGGGACAAGTTGA 597 0.4104 MEGQPAKRRRVYSLEPNKVVQAAFTRKYLNYLVPALMKIKERSTSAEQQQNNIHCDVKDVVKYEVDMAMVFSAQGFAWSNALKTNLQRGEGGNNVDSEGSLIRTNDYDDQNEMAPLPLSSSKSHANKILVSNKYKDMPGLMKEDEDDDEVMNSQLRSLRILIPGGEEMCNEQMVAELESYISCLQMQVNILQCLAGTS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1424 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 3 196 IPR044660 GO:0006355
Dod03g1424 198 MobiDBLite consensus disorder prediction 88 119 - -
Dod03g1424 198 CDD bHLH_AtIBH1_like 142 195 IPR044549 GO:0006355
Dod03g1424 198 PANTHER TRANSCRIPTION FACTOR BHLH146 3 196 - -
Dod03g1424 198 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1424 Dod-Chr3 18586579 18587855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1424 7 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 48.684 9.90e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1424 - - aprc:113852314 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2264 05 48779821 48781282 Dod03g1424 03 18586579 18587855 PCT