Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1419 ATGTCAAGCATAGGACAACACCAATCCATTATTGGAGTAGCCATCCTCGTTGGGGTTGTGCTGAAGATTGGTATATTGATTTATGTATGCCGTGAAAGACACAAGAAGAGAGGCGGGTCAGTTAGCCCAGACTCACAAGTTCTGACACTCACTATGGATAAATTTCTGAATGACATTGAAAGGGAGAAGCCAATCAGATTTACTGATCAGCAGCTGAGGATTGCTACTGATAACTACTCCAATTTGTTGGGGTCAGGAGGTTTTGGAGCAGTTTATAAGGGAATTTTCAGTAATGGGGTCATGGTTGCGGTTAAGGTTCTGTTTGGCAGTTCTGACAAGAGAATTGAGGAGCAGTTTATGGCAGAAATGGGTACAATTGGTAGGGTTCACCATTTCAATCTAGTTCGGCTATATGGATTTTGTTTTGAAAGGAACTTGATAGCACTGGTTTATGAATACATGGGGAATGGCTCACTTGACAAGTATCTGTTTCAAGAGAACAAGACAATAGGATTTGAGAAGCTTCAAGAGATTGCAGTTGGGACAGCCAGAGGCATTGCTTACTTGCATGAAGAGTGCCAACAGAGAATAATCCACTATGACATCAAGCCAGGAAACATTCTCTTGGACAAGAACTTCAATCCCAGAGTCGCGGATTTCGGTTTGGCGAAGCTTTGCAACAGGGATAATACTCATGTAACCATGACTGGATGTAGGGGGACTCCAGGTTATGCCGCACCGGAGCTTTGGATACCGCTTCCTGTAACTCACAAGTGTGATGTTTACAGCTTTGGCATGCTGTTATTTGAAATCATTGGTAGGAGAAGAAACTTTGACATTAAACTTTCAGAAAGCCAGGAGTGGTTTCCAATATGGGTTTGGAAAAAAATTGATGCTGGACAACTGGGGGAGTTGATAACAAACGGATGTGATATAGAGGAGAAACATAAGGAGATGGCAGAAAGAATGGTGAAGGCAGCTCTTTTGTGTGTTCAGTATAGGCCAGAATCAAGGCCTATGATGAGTGCTGTAGTGAAAATGTTCGAAGGTTCAGCAGAAATTCCACATCTAGTCAACCCATTCCAACGCATGATGGATGGTAGTTTTGTTAGTCATCCATTCCAAGTTGCACAAACCGGTACGGATCATACAAGTATTCATTCTGGCTCTTCTGTTATGGTAGTTGACTCTAGTTTTGTATGTGCTACTCCTGTTATGAGGAAGCATGAGATTGAATTAGCCTCCAGCATGGGGTGA 1257 0.4264 MSSIGQHQSIIGVAILVGVVLKIGILIYVCRERHKKRGGSVSPDSQVLTLTMDKFLNDIEREKPIRFTDQQLRIATDNYSNLLGSGGFGAVYKGIFSNGVMVAVKVLFGSSDKRIEEQFMAEMGTIGRVHHFNLVRLYGFCFERNLIALVYEYMGNGSLDKYLFQENKTIGFEKLQEIAVGTARGIAYLHEECQQRIIHYDIKPGNILLDKNFNPRVADFGLAKLCNRDNTHVTMTGCRGTPGYAAPELWIPLPVTHKCDVYSFGMLLFEIIGRRRNFDIKLSESQEWFPIWVWKKIDAGQLGELITNGCDIEEKHKEMAERMVKAALLCVQYRPESRPMMSAVVKMFEGSAEIPHLVNPFQRMMDGSFVSHPFQVAQTGTDHTSIHSGSSVMVVDSSFVCATPVMRKHEIELASSMG* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1419 418 PANTHER PUTATIVE-RELATED 10 414 - -
Dod03g1419 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Dod03g1419 418 Pfam Protein tyrosine and serine/threonine kinase 81 347 IPR001245 GO:0004672|GO:0006468
Dod03g1419 418 ProSitePatterns Protein kinases ATP-binding region signature. 83 105 IPR017441 GO:0005524
Dod03g1419 418 Gene3D Transferase(Phosphotransferase) domain 1 154 357 - -
Dod03g1419 418 SMART serkin_6 77 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1419 418 ProSiteProfiles Protein kinase domain profile. 77 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod03g1419 418 Gene3D Phosphorylase Kinase; domain 1 52 153 - -
Dod03g1419 418 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 414 IPR045874 GO:0004672
Dod03g1419 418 SUPERFAMILY Protein kinase-like (PK-like) 61 348 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1419 Dod-Chr3 18429832 18431227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1419 66 366 Receptor kinase-like Gene Family AT5G38280 40.127 5.69e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Dod03g1419 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1419 - - gmx:100816921 631.713