Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1418 ATGGTTGAAAAGATGAAGAAAAGCAACTTTGAGGTGTTGGGAATGTGCTGTGCTACAGAGGCTGCACTGGTGGAAAGAATTCTGAAGCCTCTTCATGGTGTCAAAGAAGTCTCAGTAATAGTCCCCACGAAATCAGTAACCGTGGTCCATGATGCTGCCTTAATTTCTGAGTCACAAATAGCTGATGCACTGAATTCAGCAAGGCTTGAAGCAAGTTTGAGACTACAGGGAGAGACCAATGATGAAAAGAAATGGCCAGACTTACCTACATTGGCTTGCGGCTTCTTACTGGCTCTTTCTTTCTTGAAGTACATATATCAACCTTTAGAATTGTTGGCTCTTGGTTCTGTTGCCATTGGCTCCCCTAAACTTCTATTCAGGGCCATAGCTTCCATTAGGGCTCTTACTCTTAATATCAATATCCTGGTTCTATTGTCAGTGTGTGCTACTGTTGCTTTACAAGATTTCTGGGAGGCTGGTGTGATCGTTTTCCTATTTTCCATTGCTCAGTGGCTTGAGACAAGAGCAACTCACAAGGCAATGGTTTCCATGTCCACTTTAATGAGCATGGCCCCTCAAAAGGCCACTGTTGCTGATAATGGAGAACATGTTGATGTCAATGATGTTGAGATCAACACCATCCTTGCAGTCAAGGCCGGTGATGCTATTCCCCTCGATGGAGTTGTGGTGGAAGGAAAGTGTGAAGTTGATGAAAAGATGTTGACAGGAGAACCATTCCCTGTCACCAAAGAGTTGGATTCAGTAGTTTGGGCTGGAACTATTAATCTGAATGGATATATAAGTGTTAAAACTACTGTGTTGGCAGAGGACACAGTGGTGGCAAGAATGTCAAAGCTTGTTGAAGAGGCTCATAGCAGAAAATCTAGAGCACAAAGGTTCATAGACCATTTTGCTAATTACTATATTCCTGTGGTGGTCTTGATTTCAGCTGGCATTGCTGCGGTTCCAGCTGCATTAGGAGTTCCTGATATTGACCCTTGGTTTCATCTAGCAATTGTGGTTTTATTGAGTGCATGCCCTTGTTCTCTCATCCTCTCCACACCTGTTGCAATCTTTTGTGGTCTCACAAAAGCTGCAACAAGTGGTTTACTACTGAAAGGAGGAGATTATCTTGAAACACTTTCTGGAATTAAGACAGTAGCTTTTGATAAAACAGGCACAATAACAAGAGGAGAGTTCACTGTAACTGATTTTTGTGCTGTTGTAGATGATTTTAGCATTGAAACATTGTTGTACTGGGTTTCATGTATTGAGAGTAAATCAAGTCATCCTATGGCAGCTGCACTAGTGGAATTTGGAGTGTTGCACTCTATCAAACCACTCCCTGAGAATGTGGAGGATTTTCAGAATTTTCCAGGGGAAGGAGTTTATGGTAAAATTGATGGGAAGGATATCTATATAGGAAATAGGAGAATTGGTGTCAGAGCTGGTTGTGAAAGAGATCCAGTGTTTCAAATCAAAGAAGAAAGAAATGGTTATATATACTGTGGACAAACTCTGATTGGAGTCTTCAGCCTAGTTGACACTTGCAGATCAGGTGCTTTGGAGGCAATTGAGCAGCTAAAGTCATTAGGTGTCAGATCAGTCATGCTGACAGGAGATAGCACTCAGGCTGCGAAGTATGTTGAGAGTCAGTTGAACCATGCTCTAGATGTTGTTCATGCAGAGCTTCTACCTGTGGAAAAGGCAGTGATTGTTGAGAATTTGAAGAAAGTTGGGCTAACAGCCATGATCGGAGATGGCGTGAATGATGCTCCTGCATTAGCTACAGCTGACATTGGCATCTCAATGGGGATATCAGGATCTGCTCTTGCAATTGAGACAGCCAATGCAATCCTCATGTCAAATGACATCAGAAAAATACCTGAAGCCATTCAGCTAGCAAGAAAGACTACTAGGAAGCTCATTGAGAATGTCATTGTTTCAATTGGCACAAAGAGTGCCATACTAGCATTGGCAATTGCAGGATATCCAATAATATGGCTTGCTGTGCTGACTGATGTTGGGACCTGTTTACTTGTGATTCTCAATAGTATGTTAATTTTACACGACAAAACCAGATATGAAAAAGGGTCTCAAATATCTAAATACCCCACCTTCTTTGGAGATATGAGCAAAACTCTACTAGACAAACAAAGGGATAGTGATGAGCAACAAGGGCTTCTCACTGCGGTAAGGTGTGGTGAAGGTGAAGATTGCTGTAAACATGAATCTTCAGGACCTTCAAATTTTAGCTTACTCAAGGGAAACCATCATGGGGAAATGGTCAGTGGTGAAGTTCATGCAGTGAAACTTTGCAATGATTGCTGTTTAGACAAAGTCAAAATGTGCGAAGACTCCTCATGCAGAAGTAATAATAGCTCTGATTGTTGCCAGTTACTAAACAAAGAAGTGCACACCAAAACTGAAAAATGTGGCACTGGATCTGTTATATTTGGGGCACAAAATGACAACATTGCTACTATGGAGTCTTCTGCCTATAAGGGCAAATCTATGGATATCTCAGAGTTGTCTGAGACAAGTGGGAGTCCCAAGTGCTGCAAAAACGGATGCTGCAACAATCGCGTTAATGATGTCAGTAGTCTTAGCATACCAGAAATTGTTATTGAGTGA 2634 0.418 MVEKMKKSNFEVLGMCCATEAALVERILKPLHGVKEVSVIVPTKSVTVVHDAALISESQIADALNSARLEASLRLQGETNDEKKWPDLPTLACGFLLALSFLKYIYQPLELLALGSVAIGSPKLLFRAIASIRALTLNINILVLLSVCATVALQDFWEAGVIVFLFSIAQWLETRATHKAMVSMSTLMSMAPQKATVADNGEHVDVNDVEINTILAVKAGDAIPLDGVVVEGKCEVDEKMLTGEPFPVTKELDSVVWAGTINLNGYISVKTTVLAEDTVVARMSKLVEEAHSRKSRAQRFIDHFANYYIPVVVLISAGIAAVPAALGVPDIDPWFHLAIVVLLSACPCSLILSTPVAIFCGLTKAATSGLLLKGGDYLETLSGIKTVAFDKTGTITRGEFTVTDFCAVVDDFSIETLLYWVSCIESKSSHPMAAALVEFGVLHSIKPLPENVEDFQNFPGEGVYGKIDGKDIYIGNRRIGVRAGCERDPVFQIKEERNGYIYCGQTLIGVFSLVDTCRSGALEAIEQLKSLGVRSVMLTGDSTQAAKYVESQLNHALDVVHAELLPVEKAVIVENLKKVGLTAMIGDGVNDAPALATADIGISMGISGSALAIETANAILMSNDIRKIPEAIQLARKTTRKLIENVIVSIGTKSAILALAIAGYPIIWLAVLTDVGTCLLVILNSMLILHDKTRYEKGSQISKYPTFFGDMSKTLLDKQRDSDEQQGLLTAVRCGEGEDCCKHESSGPSNFSLLKGNHHGEMVSGEVHAVKLCNDCCLDKVKMCEDSSCRSNNSSDCCQLLNKEVHTKTEKCGTGSVIFGAQNDNIATMESSAYKGKSMDISELSETSGSPKCCKNGCCNNRVNDVSSLSIPEIVIE* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1418 877 Gene3D - 177 291 - -
Dod03g1418 877 CDD P-type_ATPase_HM 90 687 - -
Dod03g1418 877 ProSitePatterns Hypothetical cof family signature 2. 585 607 - -
Dod03g1418 877 Gene3D - 379 636 IPR023214 -
Dod03g1418 877 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 382 IPR023298 -
Dod03g1418 877 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 3 809 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 531 541 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 609 621 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 509 520 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Dod03g1418 877 PRINTS P-type cation-transporting ATPase superfamily signature 585 604 - -
Dod03g1418 877 Pfam Heavy-metal-associated domain 10 64 IPR006121 GO:0046872
Dod03g1418 877 Pfam E1-E2 ATPase 190 366 - -
Dod03g1418 877 SUPERFAMILY HAD-like 386 686 IPR036412 -
Dod03g1418 877 Gene3D - 1 75 - -
Dod03g1418 877 Pfam haloacid dehalogenase-like hydrolase 384 599 - -
Dod03g1418 877 Gene3D - 399 517 IPR023299 GO:0000166
Dod03g1418 877 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 687 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PRINTS Cadmium-transporting ATPase signature 21 42 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PRINTS Cadmium-transporting ATPase signature 174 194 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PRINTS Cadmium-transporting ATPase signature 10 19 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PRINTS Cadmium-transporting ATPase signature 272 286 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PRINTS Cadmium-transporting ATPase signature 253 269 IPR027256 GO:0006812|GO:0016021|GO:0019829
Dod03g1418 877 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 3 809 - -
Dod03g1418 877 SUPERFAMILY Calcium ATPase, transduction domain A 193 287 IPR008250 -
Dod03g1418 877 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Dod03g1418 877 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 669 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod03g1418 877 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Dod03g1418 877 SUPERFAMILY HMA, heavy metal-associated domain 3 73 IPR036163 GO:0046872
Dod03g1418 877 CDD HMA 10 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1418 Dod-Chr3 18377422 18382570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1418 3 741 Primary Pumps ATPases AT4G30110 57.507 0.0 868
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1418 K01534 - gmx:100815324 1314.29